RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SENP7Q9BQF6 1050 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 UBIAD1Q9Y5Z9 338 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 SPDYE3A6NKU9 549 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 GJB5O95377 273 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 MARK3P27448 753 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 ARHGAP4P98171 946 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 TFF2Q03403 129 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 RTN1Q16799 776 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 SYNE3Q6ZMZ3 975 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 DHX32Q7L7V1 743 aaKnown RBP19.03■□□□□ 0.64
PTPRK-208ENST00000392449 GDPD5Q8WTR4 605 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 GPRASP2Q96D09 838 aa19.03■□□□□ 0.64
PTPRK-208ENST00000392449 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
PTPRK-208ENST00000392449 SIP14410 1827 aa19.02■□□□□ 0.64
PTPRK-208ENST00000392449 KLF18A0A0U1RQI7 1052 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 GSTTP1A0A1W2PQM5 241 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 ZBTB43O43298 467 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 CDC27P30260 824 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 NAPAP54920 295 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 ADAM17P78536 824 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 GRB10Q13322 594 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 MKRN4PQ13434 485 aaPredicted RBP19.02■□□□□ 0.63
PTPRK-208ENST00000392449 MTMR1Q13613 665 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 SKIV2LQ15477 1246 aaKnown RBP19.02■□□□□ 0.63
PTPRK-208ENST00000392449 RUFY4Q6ZNE9 571 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 CYP2W1Q8TAV3 490 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 ATXN2LQ8WWM7 1075 aaKnown RBP19.02■□□□□ 0.63
PTPRK-208ENST00000392449 ZBTB10Q96DT7 871 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 ASB2Q96Q27 587 aa19.02■□□□□ 0.63
PTPRK-208ENST00000392449 FAM217BQ9NTX9 383 aaPredicted RBP19.02■□□□□ 0.63
PTPRK-208ENST00000392449 NAP1L2Q9ULW6 460 aaPredicted RBP19.02■□□□□ 0.63
PTPRK-208ENST00000392449 V9GY48 417 aaPredicted RBP19.02■□□□□ 0.63
PTPRK-208ENST00000392449 EMSYQ7Z589 1322 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 KAT6AQ92794 2004 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 GOLGA8AA7E2F4 631 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 GOLGA8BA8MQT2 603 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 LPXNO60711 386 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 PLEKHG4Q58EX7 1191 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 MYOCDQ8IZQ8 938 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 SYMPKQ92797 1274 aaKnown RBP19.01■□□□□ 0.63
PTPRK-208ENST00000392449 RBM28Q9NW13 759 aaKnown RBP19.01■□□□□ 0.63
PTPRK-208ENST00000392449 TMEM260Q9NX78 707 aa19.01■□□□□ 0.63
PTPRK-208ENST00000392449 TCF20Q9UGU0 1960 aaKnown RBP19■□□□□ 0.63
PTPRK-208ENST00000392449 STXBP3O00186 592 aa19■□□□□ 0.63
PTPRK-208ENST00000392449 GTPBP6O43824 516 aaPredicted RBP19■□□□□ 0.63
PTPRK-208ENST00000392449 TSGA10IPQ3SY00 556 aa19■□□□□ 0.63
PTPRK-208ENST00000392449 RAD9AQ99638 391 aa19■□□□□ 0.63
PTPRK-208ENST00000392449 JADE2Q9NQC1 790 aa19■□□□□ 0.63
PTPRK-208ENST00000392449 LINC01553A4QN01 128 aa18.99■□□□□ 0.63
PTPRK-208ENST00000392449 ADAMTS3O15072 1205 aa18.99■□□□□ 0.63
PTPRK-208ENST00000392449 MRPS5P82675 430 aaKnown RBP18.99■□□□□ 0.63
PTPRK-208ENST00000392449 GIMAP8Q8ND71 665 aaPredicted RBP18.99■□□□□ 0.63
PTPRK-208ENST00000392449 CDHR1Q96JP9 859 aa18.99■□□□□ 0.63
PTPRK-208ENST00000392449 RIC8AQ9NPQ8 531 aa18.99■□□□□ 0.63
PTPRK-208ENST00000392449 EFCAB14O75071 495 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 GNAT1P11488 350 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 POU3F3P20264 500 aaPredicted RBP18.98■□□□□ 0.63
PTPRK-208ENST00000392449 ADCY7P51828 1080 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 APOBRQ0VD83 1088 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 PPFIA1Q13136 1202 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 ADAMTS19Q8TE59 1207 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 SEPT1Q8WYJ6 367 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 GLG1Q92896 1179 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 NECAB3Q96P71 396 aaPredicted RBP18.98■□□□□ 0.63
PTPRK-208ENST00000392449 PCYT2Q99447 389 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 KCNH7Q9NS40 1196 aa18.98■□□□□ 0.63
PTPRK-208ENST00000392449 PPFIA3O75145 1194 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 CHRNA1P02708 482 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 AMHP03971 560 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 ARP10275 920 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 ADD1P35611 737 aaKnown RBP18.97■□□□□ 0.63
PTPRK-208ENST00000392449 KCNQ1P51787 676 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 IGBP1P78318 339 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 SEPT8Q92599 483 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 JAKMIP1Q96N16 626 aaKnown RBP18.97■□□□□ 0.63
PTPRK-208ENST00000392449 UIMC1Q96RL1 719 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 MXRA8Q9BRK3 442 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 C17orf80Q9BSJ5 609 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 ANO3Q9BYT9 981 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 SUGCTQ9HAC7 445 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 NRCAMQ92823 1304 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.97■□□□□ 0.63
PTPRK-208ENST00000392449 SMCO2A6NFE2 343 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 UPP2O95045 317 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 KRT32Q14532 448 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 GRIK4Q16099 956 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 MARCH8Q5T0T0 291 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 Q6ZUG5 572 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 JPH1Q9HDC5 661 aaPredicted RBP18.97■□□□□ 0.63
PTPRK-208ENST00000392449 BARHL2Q9NY43 387 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 ERAP1Q9NZ08 941 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 SNX14Q9Y5W7 946 aa18.97■□□□□ 0.63
PTPRK-208ENST00000392449 CAND2O75155 1236 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 GHRP10912 638 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 ERVK-21P61565 698 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 FGD1P98174 961 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 ITGB3BPQ13352 177 aaPredicted RBP18.96■□□□□ 0.63
PTPRK-208ENST00000392449 PPP1R18Q6NYC8 613 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 BRF1Q92994 677 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms