RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 HOXC8P31273 242 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 USP11P51784 963 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 EPHB4P54760 987 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 C9orf50Q5SZB4 431 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 UTP14CQ5TAP6 766 aaKnown RBP14.41□□□□□ -0.1
GGPS1-203ENST00000391855 KRT25Q7Z3Z0 450 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 CYP2W1Q8TAV3 490 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 RASGRP4Q8TDF6 673 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 TNPO1Q92973 898 aaKnown RBP14.41□□□□□ -0.1
GGPS1-203ENST00000391855 BCAS3Q9H6U6 928 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 TBC1D22BQ9NU19 505 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 ERAP1Q9NZ08 941 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 PKD2L1Q9P0L9 805 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
GGPS1-203ENST00000391855 UMODL1Q5DID0 1318 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 GSTTP1A0A1W2PQM5 241 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 CCL23P55773 120 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 RABEP1Q15276 862 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 ZSCAN31Q96LW9 406 aaPredicted RBP14.4□□□□□ -0.1
GGPS1-203ENST00000391855 PHF20Q9BVI0 1012 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 AZI2Q9H6S1 392 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 BRMS1Q9HCU9 246 aa14.4□□□□□ -0.1
GGPS1-203ENST00000391855 M0R2N6 131 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 IPO5O00410 1097 aaKnown RBP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 SOX1O00570 391 aaPredicted RBP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 CAND2O75155 1236 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 LGR5O75473 907 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 LARGE1O95461 756 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 CTDNEP1O95476 244 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 SLC26A2P50443 739 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 ITGB3BPQ13352 177 aaPredicted RBP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 NONOQ15233 471 aaKnown RBP eCLIP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 TMEM240Q5SV17 173 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 TRIM50Q86XT4 487 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 NECAB1Q8N987 351 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 NSUN7Q8NE18 718 aaKnown RBP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 TBCKQ8TEA7 893 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 GLG1Q92896 1179 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 AIFM3Q96NN9 605 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 ZNF577Q9BSK1 485 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 SH2B1Q9NRF2 756 aaPredicted RBP14.39□□□□□ -0.11
GGPS1-203ENST00000391855 NRCAMQ92823 1304 aa14.39□□□□□ -0.11
GGPS1-203ENST00000391855 CCDC194A0A1B0GVG4 234 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 ADAMTS3O15072 1205 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 FGBP02675 491 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 ACTN1P12814 892 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 SELPP16109 830 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 ACTR2P61160 394 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 SMAD3P84022 425 aaKnown RBP14.38□□□□□ -0.11
GGPS1-203ENST00000391855 KRT76Q01546 638 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 NPY5RQ15761 445 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 ATP6V0A1Q93050 837 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 KIF2CQ99661 725 aa14.38□□□□□ -0.11
GGPS1-203ENST00000391855 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
GGPS1-203ENST00000391855 LLPHQ9BRT6 129 aaKnown RBP14.38□□□□□ -0.11
GGPS1-203ENST00000391855 ST18O60284 1047 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 ATG7O95352 703 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 RPLP2P05387 115 aaKnown RBP14.37□□□□□ -0.11
GGPS1-203ENST00000391855 ACRP10323 421 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 TRIM29Q14134 588 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 PRR16Q569H4 304 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 RASIP1Q5U651 963 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 FAM160B1Q5W0V3 765 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 ZNF746Q6NUN9 644 aaPredicted RBP14.37□□□□□ -0.11
GGPS1-203ENST00000391855 ZNF365Q70YC5 407 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 C16orf59Q7L2K0 433 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 PLPPR4Q7Z2D5 763 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 SMAP1Q8IYB5 467 aaPredicted RBP14.37□□□□□ -0.11
GGPS1-203ENST00000391855 DHX38Q92620 1227 aaKnown RBP14.37□□□□□ -0.11
GGPS1-203ENST00000391855 LENG9Q96B70 501 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 SCLYQ96I15 445 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 LRCH3Q96II8 777 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 KCNJ14Q9UNX9 436 aa14.37□□□□□ -0.11
GGPS1-203ENST00000391855 TMEM265A0A087WTH1 108 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 CYP3A7-CYP3A51PA0A087WV96 503 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.36□□□□□ -0.11
GGPS1-203ENST00000391855 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.36□□□□□ -0.11
GGPS1-203ENST00000391855 CKBP12277 381 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 FDPSP14324 419 aaKnown RBP14.36□□□□□ -0.11
GGPS1-203ENST00000391855 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
GGPS1-203ENST00000391855 CYP3A7P24462 503 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 HMGN5P82970 282 aaKnown RBP14.36□□□□□ -0.11
GGPS1-203ENST00000391855 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 TRIM71Q2Q1W2 868 aaKnown RBP14.36□□□□□ -0.11
GGPS1-203ENST00000391855 Q4G0T1 1027 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 MIS18BP1Q6P0N0 1132 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 TAF2Q6P1X5 1199 aa14.36□□□□□ -0.11
GGPS1-203ENST00000391855 LMBR1Q8WVP7 490 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms