RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 HIC1Q14526 733 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 PLEKHG4Q58EX7 1191 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 TJAP1Q5JTD0 557 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 FAM26DQ5JW98 314 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 WWC2Q6AWC2 1192 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 RAB11FIP4Q86YS3 637 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 SEPT8Q92599 483 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 APBB2Q92870 758 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 SETD4Q9NVD3 440 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 INSL6Q9Y581 213 aa15.55■□□□□ 0.08
TRBV4-1-201ENST00000390357 GSTTP1A0A1W2PQM5 241 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 hCG_1642624A0A1W2PR95 340 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 RRN3P2A6NIE6 340 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 METAP2P50579 478 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 TAP1Q03518 808 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 UBE2SQ16763 222 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 PFKFB3Q16875 520 aaPredicted RBP15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 Q6ZUG5 572 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 NIPA1Q7RTP0 329 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 GLG1Q92896 1179 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 SDF4Q9BRK5 362 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 AZI2Q9H6S1 392 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 KCNH7Q9NS40 1196 aa15.54■□□□□ 0.08
TRBV4-1-201ENST00000390357 ESYT2A0FGR8 921 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 STXBP3O00186 592 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 PRPF3O43395 683 aaKnown RBP15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 GNA11P29992 359 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 CLK2P49760 499 aaKnown RBP15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 SLC26A2P50443 739 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 ARHGAP4P98171 946 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 AAK1Q2M2I8 961 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 CEP55Q53EZ4 464 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 PLPPR4Q7Z2D5 763 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 PPM1EQ8WY54 764 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 WNT8BQ93098 351 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 AGXT2Q9BYV1 514 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 C6orf50Q9HD87 102 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 JPH1Q9HDC5 661 aaPredicted RBP15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 FAM217BQ9NTX9 383 aaPredicted RBP15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 SLC9A2Q9UBY0 812 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
TRBV4-1-201ENST00000390357 MEIS1O00470 390 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 SCG2P13521 617 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 CDC27P30260 824 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 ADD1P35611 737 aaKnown RBP15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 ZNF76P36508 570 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 SREBF1P36956 1147 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 EVCP57679 992 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 MRPS5P82675 430 aaKnown RBP15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 SP4Q02446 784 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 MBTPS1Q14703 1052 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 SKAP1Q86WV1 359 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 LMBR1Q8WVP7 490 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 JAKMIP1Q96N16 626 aaKnown RBP15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 ANO3Q9BYT9 981 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 ZMYND12Q9H0C1 365 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 THEGQ9P2T0 379 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 NAP1L2Q9ULW6 460 aaPredicted RBP15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 SQORQ9Y6N5 450 aa15.52■□□□□ 0.08
TRBV4-1-201ENST00000390357 PTPRSQ13332 1948 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 MBLAC1A4D2B0 266 aaPredicted RBP15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 ATG7O95352 703 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 CYP3A4P08684 503 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 RPS6KB1P23443 525 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 ERVK-21P61565 698 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 DEFB103AP81534 67 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 PPFIA1Q13136 1202 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 BICD2Q8TD16 824 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 ARNTL2Q8WYA1 636 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 BRF1Q92994 677 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 TOP1MTQ969P6 601 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 SAMD11Q96NU1 681 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 ASB2Q96Q27 587 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 TGS1Q96RS0 853 aaKnown RBP15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 MTCH2Q9Y6C9 303 aa15.51■□□□□ 0.07
TRBV4-1-201ENST00000390357 NID2Q14112 1375 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 MICAL3Q7RTP6 2002 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 NEFLP07196 543 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 STAT5BP51692 787 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 APOBRQ0VD83 1088 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 CCDC85BQ15834 202 aaPredicted RBP15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 GRIK4Q16099 956 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 IER5Q5VY09 327 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 TYW1BQ6NUM6 668 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 TRIM50Q86XT4 487 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 NME8Q8N427 588 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 RNF26Q9BY78 433 aaPredicted RBP15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 AGO4Q9HCK5 861 aaKnown RBP15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 COG5Q9UP83 839 aa15.5■□□□□ 0.07
TRBV4-1-201ENST00000390357 UNC80Q8N2C7 3258 aa15.49■□□□□ 0.07
TRBV4-1-201ENST00000390357 HTRA4P83105 476 aaPredicted RBP15.49■□□□□ 0.07
TRBV4-1-201ENST00000390357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRBV4-1-201ENST00000390357 RUFY3Q7L099 469 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms