RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TACC1O75410 805 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 FGFR1OPO95684 399 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 HERVK_113P62684 666 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 DNAJC21Q5F1R6 531 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 FAN1Q9Y2M0 1017 aa13.36□□□□□ -0.27
CAPRIN1-202ENST00000389645 PNMA6FA0A0J9YX94 578 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 GRB10Q13322 594 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 WDR59Q6PJI9 974 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 MYOCDQ8IZQ8 938 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 EHBP1Q8NDI1 1231 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 PANK4Q9NVE7 773 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 POTECB2RU33 542 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 CHMP2AO43633 222 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 GPATCH4Q5T3I0 446 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 MKL1Q969V6 931 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 ACBD3Q9H3P7 528 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 CUEDC2Q9H467 287 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 ATRNL1Q5VV63 1379 aa13.35□□□□□ -0.27
CAPRIN1-202ENST00000389645 LRRC53A6NM62 1247 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 H3BQF6 201 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 EPHB6O15197 1021 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 SMARCA1P28370 1054 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 PRPHP41219 470 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 GMPSP49915 693 aaPredicted RBP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 APBA1Q02410 837 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 CASP8Q14790 479 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 VWA3BQ502W6 1294 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 DCAF17Q5H9S7 520 aaPredicted RBP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 LEKR1Q6ZMV7 388 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 DAGLBQ8NCG7 672 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 MMTAG2Q9BU76 263 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 ZBTB5O15062 677 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 NCK2O43639 380 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 RASA3Q14644 834 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 EHD2Q9NZN4 543 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 FZD1Q9UP38 647 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 MYL1P05976 194 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 KIF11P52732 1056 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 ALS2CR12Q96Q35 445 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 ADAM21Q9UKJ8 722 aa13.34□□□□□ -0.27
CAPRIN1-202ENST00000389645 A0A1W2PQC6 194 aa13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 UBXN2AP68543 259 aa13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 UNC13DQ70J99 1090 aa13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 RIN2Q8WYP3 895 aaPredicted RBP13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 C7orf25Q9BPX7 421 aa13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 LSM14BQ9BX40 385 aaKnown RBP13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.27
CAPRIN1-202ENST00000389645 HOXA13P31271 388 aaPredicted RBP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 NOP2P46087 812 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 EDIL3O43854 480 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 CKAP4Q07065 602 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 MAN2A1Q16706 1144 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 RAD54LQ92698 747 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 PNMA5Q96PV4 448 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 SPAG5Q96R06 1193 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 CNOT7Q9UIV1 285 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 CD2APQ9Y5K6 639 aa13.33□□□□□ -0.28
CAPRIN1-202ENST00000389645 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 SPDYE3A6NKU9 549 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 DGKZQ13574 1117 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 TNIP1Q15025 636 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 BEND6Q5SZJ8 279 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 DNAJC7Q99615 494 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 VPS33BQ9H267 617 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 PKD2L1Q9P0L9 805 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 SFI1A8K8P3 1242 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 MYO1CO00159 1063 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 CLGNO14967 610 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 PLS1Q14651 629 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 NFRKBQ6P4R8 1299 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 CCDC65Q8IXS2 484 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms