RNA–Protein interactions for RNA: ENST00000389425.7

SEMA6D-205, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 2,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-205ENST00000389425 CTNNA1P35221 906 aaKnown RBP20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 DNA2P51530 1060 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 PPP2R2AP63151 447 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 PDIA5Q14554 519 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 SEPT2Q15019 361 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 SNCBQ16143 134 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 CDK5RAP3Q96JB5 506 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 PACSIN2Q9UNF0 486 aaPredicted RBP20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 CEP83Q9Y592 693 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 KIF4AO95239 1232 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 USP17L8P0C7I0 530 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 PSEN1P49768 467 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 IFI16Q16666 785 aaKnown RBP20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 ANKRD20A8PQ5CZ79 823 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 PARP9Q8IXQ6 854 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 FUKQ8N0W3 1084 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 TBCKQ8TEA7 893 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 SGSM3Q96HU1 749 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 ROBO3Q96MS0 1386 aa20.15■□□□□ 0.82
SEMA6D-205ENST00000389425 KCNK3O14649 394 aa20.14■□□□□ 0.82
SEMA6D-205ENST00000389425 TXKP42681 527 aa20.14■□□□□ 0.82
SEMA6D-205ENST00000389425 KLHL30Q0D2K2 578 aa20.14■□□□□ 0.82
SEMA6D-205ENST00000389425 CYB5D1Q6P9G0 228 aa20.14■□□□□ 0.82
SEMA6D-205ENST00000389425 PTF1AQ7RTS3 328 aa20.14■□□□□ 0.82
SEMA6D-205ENST00000389425 SEC16BQ96JE7 1060 aa20.14■□□□□ 0.82
SEMA6D-205ENST00000389425 KLRF2D3W0D1 207 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 CCDC188H7C350 402 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 SMARCA1P28370 1054 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 RNASE9P60153 205 aaKnown RBP20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 SF3B3Q15393 1217 aaKnown RBP20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 TMEM266Q2M3C6 531 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 DDX12PQ92771 950 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 TMEM47Q9BQJ4 181 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 RAB34Q9BZG1 259 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 CENPHQ9H3R5 247 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 ADAMTS1Q9UHI8 967 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 LEMD3Q9Y2U8 911 aa20.14■□□□□ 0.81
SEMA6D-205ENST00000389425 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 ESYT2A0FGR8 921 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 DNM1LO00429 736 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 IFFO1Q0D2I5 559 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 TRIM59Q8IWR1 403 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 CACNA2D3Q8IZS8 1091 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 MKNK2Q9HBH9 465 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 USP17L3A6NCW0 530 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 USP17L4A6NCW7 530 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 TRAF5O00463 557 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 GHRP10912 638 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 ELF1P32519 619 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 KCNQ4P56696 695 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 XRCC4Q13426 336 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 ASIC2Q16515 512 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 CALCRLQ16602 461 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 TMEM119Q4V9L6 283 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 USP17L1Q7RTZ2 530 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 TATDN2Q93075 761 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 PACSIN1Q9BY11 444 aa20.13■□□□□ 0.81
SEMA6D-205ENST00000389425 ATP8B3O60423 1300 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 LY75O60449 1722 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 SART1O43290 800 aaKnown RBP20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 TSPY3P0CV98 308 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 TSPY8P0CW00 308 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 ZBTB48P10074 688 aaPredicted RBP20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 RAPGEF1Q13905 1077 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 LRRC41Q15345 812 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 QPCTQ16769 361 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 LRRC57Q8N9N7 239 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 SEC14L1Q92503 715 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 RAPGEF5Q92565 580 aa20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.12■□□□□ 0.81
SEMA6D-205ENST00000389425 PGRMC1O00264 195 aaKnown RBP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 BYSLQ13895 437 aaKnown RBP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 SPDYCQ5MJ68 293 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 REXO1Q8N1G1 1221 aaKnown RBP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 OR2W6PQ8NHA6 318 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 GANQ9H2C0 597 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 KDM4CQ9H3R0 1056 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 SLITRK6Q9H5Y7 841 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 FBXL5Q9UKA1 691 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 SUFUQ9UMX1 484 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 BZW2Q9Y6E2 419 aaKnown RBP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 PRDX5P30044 214 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 NF2P35240 595 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 ODF2Q5BJF6 829 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 CENPTQ96BT3 561 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 DYNLL2Q96FJ2 89 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 CNOT10Q9H9A5 744 aaKnown RBP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 CNOT8Q9UFF9 292 aaKnown RBP20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 SWAP70Q9UH65 585 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 MAST2Q6P0Q8 1798 aa20.11■□□□□ 0.81
SEMA6D-205ENST00000389425 CEP104O60308 925 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms