RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 STON2Q8WXE9 905 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 GMCL1Q96IK5 515 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 UBXN10Q96LJ8 280 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 CCDC138Q96M89 665 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 NUDT16L1Q9BRJ7 211 aaKnown RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 ELAC1Q9H777 363 aaKnown RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 DBNDD1Q9H9R9 158 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 SMC3Q9UQE7 1217 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 RGPD5Q99666 1765 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 RRN3P2A6NIE6 340 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 M0R2C6 588 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 GADD45BO75293 160 aaPredicted RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 YBX3P16989 372 aaKnown RBP eCLIP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 ERVK-21P61565 698 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 AP3B2Q13367 1082 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 CYP26C1Q6V0L0 522 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 ARHGEF25Q86VW2 580 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 CCDC155Q8N6L0 562 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 OR6P1Q8NGX9 317 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 SLC35G2Q8TBE7 412 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 AIFM3Q96NN9 605 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 TAAR9Q96RI9 348 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 CHCHD6Q9BRQ6 235 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 AGO4Q9HCK5 861 aaKnown RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 ZDHHC3Q9NYG2 299 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 NXF1Q9UBU9 619 aaKnown RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 PA2G4Q9UQ80 394 aaKnown RBP6.56□□□□□ -1.36
ERCC4-202ENST00000389138 COL18A1P39060 1754 aa6.56□□□□□ -1.36
ERCC4-202ENST00000389138 CRB1P82279 1406 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 TRIM75PA6NK02 468 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 H3BRJ5 948 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 GRIN3BO60391 1043 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 PCSK2P16519 638 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CTNNA1P35221 906 aaKnown RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 NEK4P51957 841 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 HIRAP54198 1017 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CPLX2Q6PUV4 134 aaKnown RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 TTC6Q86TZ1 520 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 NLRP8Q86W28 1048 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 RBBP8NLQ8NC74 664 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 LILRB1Q8NHL6 650 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 MGARPQ8TDB4 240 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 ADAMTS18Q8TE60 1221 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 AFAP1L1Q8TED9 768 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 SEC62Q99442 399 aaKnown RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 SLC26A6Q9BXS9 759 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 TRIM39Q9HCM9 518 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 TOPORSQ9NS56 1045 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 IFT80Q9P2H3 777 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CDC23Q9UJX2 597 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 BCS1LQ9Y276 419 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 GPC6Q9Y625 555 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 BRD4O60885 1362 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CPDO75976 1380 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 EIF3AQ14152 1382 aaKnown RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 H0Y3Z8 333 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 F11P03951 625 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CYP11A1P05108 521 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 BPIP17213 487 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 ATF7P17544 494 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 POLR2BP30876 1174 aaKnown RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 IRX3P78415 501 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 PPFIA1Q13136 1202 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 ZNF267Q14586 743 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 LBRQ14739 615 aaKnown RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 NLRP13Q86W25 1043 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 NRSN1Q8IZ57 195 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 ALDH16A1Q8IZ83 802 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 CARNMT1Q8N4J0 409 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 APOL5Q9BWW9 433 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 C22orf23Q9BZE7 217 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 PLEKHA5Q9HAU0 1116 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 BRMS1Q9HCU9 246 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 NFKBIL1Q9UBC1 381 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-202ENST00000389138 PCDHGB6Q9Y5F9 930 aa6.55□□□□□ -1.36
ERCC4-202ENST00000389138 H7C1W4 665 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 AHCYL1O43865 530 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 TATP17735 454 aaPredicted RBP6.54□□□□□ -1.36
ERCC4-202ENST00000389138 CASQ1P31415 396 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 KIF5BP33176 963 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 PHKA2P46019 1235 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 MAN2A2P49641 1150 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 HTRA3P83110 453 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 FGD2Q7Z6J4 655 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 ACRBPQ8NEB7 543 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 CFAP53Q96M91 514 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 ZNF830Q96NB3 372 aaPredicted RBP6.54□□□□□ -1.36
ERCC4-202ENST00000389138 DESI2Q9BSY9 194 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 DHX36Q9H2U1 1008 aaKnown RBP6.54□□□□□ -1.36
ERCC4-202ENST00000389138 ANTXR1Q9H6X2 564 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 IFT22Q9H7X7 185 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 ARHGEF4Q9NR80 690 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 NKIRAS2Q9NYR9 191 aa6.54□□□□□ -1.36
ERCC4-202ENST00000389138 TNPO3Q9Y5L0 923 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms