RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 RILPL2Q969X0 211 aa24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 ZFP91Q96JP5 570 aaPredicted RBP24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 UBAC1Q9BSL1 405 aa24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 IGFLR1Q9H665 355 aa24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 BCAS3Q9H6U6 928 aa24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 PTPRZ1P23471 2315 aaPredicted RBP24.76■■□□□ 1.55
CNEP1R1-201ENST00000389134 KIAA1671Q9BY89 1806 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 TBX10O75333 385 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 STAM2O75886 525 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 MMP1P03956 469 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 ICAM3P32942 547 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 PTPN5P54829 565 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 ARHGAP4P98171 946 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 ADAM15Q13444 863 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 FCHSD1Q86WN1 690 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 PPP2R3CQ969Q6 453 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 GPR20Q99678 358 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 KRT23Q9C075 422 aa24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 RC3H2Q9HBD1 1191 aaKnown RBP24.75■■□□□ 1.55
CNEP1R1-201ENST00000389134 CHRNA1P02708 482 aa24.74■■□□□ 1.55
CNEP1R1-201ENST00000389134 GTF2F1P35269 517 aaKnown RBP eCLIP24.74■■□□□ 1.55
CNEP1R1-201ENST00000389134 IFIT1BQ5T764 474 aaKnown RBP24.74■■□□□ 1.55
CNEP1R1-201ENST00000389134 CYFIP1Q7L576 1253 aa24.74■■□□□ 1.55
CNEP1R1-201ENST00000389134 LMBR1Q8WVP7 490 aa24.74■■□□□ 1.55
CNEP1R1-201ENST00000389134 EHMT1Q9H9B1 1298 aa24.74■■□□□ 1.55
CNEP1R1-201ENST00000389134 NRCAMQ92823 1304 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 EYA4O95677 639 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 SDSP20132 328 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 BTG3Q14201 252 aaPredicted RBP24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 DIEXFQ68CQ4 756 aaKnown RBP24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 TRIM67Q6ZTA4 783 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 PRSS33Q8NF86 280 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 PBXIP1Q96AQ6 731 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 ZNF689Q96CS4 500 aaPredicted RBP24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 INPP4AQ96PE3 977 aaPredicted RBP24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 PHOX2BQ99453 314 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 CNNM2Q9H8M5 875 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 MAD2L2Q9UI95 211 aa24.73■■□□□ 1.55
CNEP1R1-201ENST00000389134 TMEM221A6NGB7 291 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 SPATA31C2B4DYI2 1134 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 M0R296 226 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 ENPP3O14638 875 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 GHRP10912 638 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 NDUFV1P49821 464 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 NAALADL2Q58DX5 795 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 TAF2Q6P1X5 1199 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 P2RX5Q93086 422 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 MSLNLQ96KJ4 702 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 PLAGL2Q9UPG8 496 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 KMT2EQ8IZD2 1858 aa24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 ZFHX2Q9C0A1 2572 aaPredicted RBP24.72■■□□□ 1.55
CNEP1R1-201ENST00000389134 PALM3A6NDB9 673 aaPredicted RBP24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 LINC01565O15544 149 aa24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 ST18O60284 1047 aa24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 MRPS9P82933 396 aaKnown RBP24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 IMMTQ16891 758 aaKnown RBP24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 RSPH3Q86UC2 560 aa24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 TRIM50Q86XT4 487 aa24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 ALG13Q9NP73 1137 aaKnown RBP24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 SPTBN4Q9H254 2564 aa24.71■■□□□ 1.55
CNEP1R1-201ENST00000389134 FRMPD4Q14CM0 1322 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 FIBPO43427 364 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 DGKIO75912 1065 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 SEMA3FQ13275 785 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 CAMK1Q14012 370 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 LPIN1Q14693 890 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 IER5LQ5T953 404 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 UTP14CQ5TAP6 766 aaKnown RBP24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 HOMER1Q86YM7 354 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 SUGP1Q8IWZ8 645 aaKnown RBP24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 SENP7Q9BQF6 1050 aa24.7■■□□□ 1.54
CNEP1R1-201ENST00000389134 MGAT3Q09327 533 aa24.69■■□□□ 1.54
CNEP1R1-201ENST00000389134 EFHBQ8N7U6 833 aa24.69■■□□□ 1.54
CNEP1R1-201ENST00000389134 DSCC1Q9BVC3 393 aa24.69■■□□□ 1.54
CNEP1R1-201ENST00000389134 RIOX1Q9H6W3 641 aa24.69■■□□□ 1.54
CNEP1R1-201ENST00000389134 LOC730098B7Z3J9 87 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 CSPG5O95196 566 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 ZXDAP98168 799 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 COASYQ13057 564 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 SEC23AQ15436 765 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 CWC27Q6UX04 472 aaKnown RBP24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 SMRP1Q8NCR6 262 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 PIGSQ96S52 555 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 RTEL1Q9NZ71 1219 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 MYO10Q9HD67 2058 aa24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 RIF1Q5UIP0 2472 aaKnown RBP24.68■■□□□ 1.54
CNEP1R1-201ENST00000389134 PLXNA4Q9HCM2 1894 aa24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 PNMA6FA0A0J9YX94 578 aa24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 HDAC1Q13547 482 aaPredicted RBP24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 RUFY4Q6ZNE9 571 aa24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 CMTR2Q8IYT2 770 aaKnown RBP24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 SPPL3Q8TCT6 385 aa24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 CLEC1BQ9P126 229 aa24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
CNEP1R1-201ENST00000389134 RRP1P56182 461 aaKnown RBP24.66■■□□□ 1.54
CNEP1R1-201ENST00000389134 TCF15Q12870 199 aa24.66■■□□□ 1.54
CNEP1R1-201ENST00000389134 CBX2Q14781 532 aaPredicted RBP24.66■■□□□ 1.54
CNEP1R1-201ENST00000389134 FBXO47Q5MNV8 452 aa24.66■■□□□ 1.54
CNEP1R1-201ENST00000389134 TSHZ1Q6ZSZ6 1077 aa24.66■■□□□ 1.54
CNEP1R1-201ENST00000389134 FBXL6Q8N531 539 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms