RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 FUT2Q10981 343 aa29.3■■■□□ 2.28
KRT18-201ENST00000388835 DBF4BQ8NFT6 615 aa29.3■■■□□ 2.28
KRT18-201ENST00000388835 EFCAB14O75071 495 aa29.3■■■□□ 2.28
KRT18-201ENST00000388835 TJAP1Q5JTD0 557 aa29.3■■■□□ 2.28
KRT18-201ENST00000388835 LMBR1Q8WVP7 490 aa29.3■■■□□ 2.28
KRT18-201ENST00000388835 JADE2Q9NQC1 790 aa29.3■■■□□ 2.28
KRT18-201ENST00000388835 PRRC2BQ5JSZ5 2229 aaKnown RBP29.29■■■□□ 2.28
KRT18-201ENST00000388835 CDC27P30260 824 aa29.29■■■□□ 2.28
KRT18-201ENST00000388835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.29■■■□□ 2.284e-9■■□□□ 11.9
KRT18-201ENST00000388835 SYMPKQ92797 1274 aaKnown RBP29.29■■■□□ 2.28
KRT18-201ENST00000388835 RIC8AQ9NPQ8 531 aa29.29■■■□□ 2.28
KRT18-201ENST00000388835 MICAL3Q7RTP6 2002 aa29.29■■■□□ 2.28
KRT18-201ENST00000388835 GSTTP1A0A1W2PQM5 241 aa29.28■■■□□ 2.28
KRT18-201ENST00000388835 GTPBP6O43824 516 aaPredicted RBP29.28■■■□□ 2.28
KRT18-201ENST00000388835 HMGB1P09429 215 aaKnown RBP29.28■■■□□ 2.28
KRT18-201ENST00000388835 MARK3P27448 753 aa29.28■■■□□ 2.28
KRT18-201ENST00000388835 ADCY7P51828 1080 aa29.28■■■□□ 2.28
KRT18-201ENST00000388835 KRT40Q6A162 431 aa29.28■■■□□ 2.28
KRT18-201ENST00000388835 SEPT1Q8WYJ6 367 aa29.28■■■□□ 2.28
KRT18-201ENST00000388835 OSBPL7Q9BZF2 842 aa29.28■■■□□ 2.28
KRT18-201ENST00000388835 FAM217BQ9NTX9 383 aaPredicted RBP29.28■■■□□ 2.28
KRT18-201ENST00000388835 GJB5O95377 273 aa29.27■■■□□ 2.28
KRT18-201ENST00000388835 MTCH2Q9Y6C9 303 aa29.27■■■□□ 2.28
KRT18-201ENST00000388835 STXBP3O00186 592 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 APOBRQ0VD83 1088 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 PLEKHG4Q58EX7 1191 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 PPP1R18Q6NYC8 613 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 ATXN2LQ8WWM7 1075 aaKnown RBP29.26■■■□□ 2.28
KRT18-201ENST00000388835 GLG1Q92896 1179 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 JAKMIP1Q96N16 626 aaKnown RBP29.26■■■□□ 2.28
KRT18-201ENST00000388835 RAD9AQ99638 391 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 TRANK1O15050 2925 aa29.26■■■□□ 2.28
KRT18-201ENST00000388835 NRCAMQ92823 1304 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 SMCO2A6NFE2 343 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 ADAM17P78536 824 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 SKIV2LQ15477 1246 aaKnown RBP29.26■■■□□ 2.27
KRT18-201ENST00000388835 MYOCDQ8IZQ8 938 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 CYP2W1Q8TAV3 490 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 MXRA8Q9BRK3 442 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 TMEM260Q9NX78 707 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 MTUS1Q9ULD2 1270 aa29.26■■■□□ 2.27
KRT18-201ENST00000388835 COL4A4P53420 1690 aaPredicted RBP29.25■■■□□ 2.27
KRT18-201ENST00000388835 REV3LO60673 3130 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 CAND2O75155 1236 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 Q6ZUG5 572 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 SEPT8Q92599 483 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 ANO3Q9BYT9 981 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 TSPYL2Q9H2G4 693 aaPredicted RBP29.25■■■□□ 2.27
KRT18-201ENST00000388835 KCNH7Q9NS40 1196 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 BARHL2Q9NY43 387 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 SNX14Q9Y5W7 946 aa29.25■■■□□ 2.27
KRT18-201ENST00000388835 MAFGO15525 162 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 AMHP03971 560 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 ADD1P35611 737 aaKnown RBP29.24■■■□□ 2.27
KRT18-201ENST00000388835 METAP2P50579 478 aaKnown RBP eCLIP29.24■■■□□ 2.272e-7■■■■□ 26.4
KRT18-201ENST00000388835 PPFIA1Q13136 1202 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 GRB10Q13322 594 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 RUFY4Q6ZNE9 571 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 ASB2Q96Q27 587 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 ERAP1Q9NZ08 941 aa29.24■■■□□ 2.27
KRT18-201ENST00000388835 hCG_1984214I3L0E3 225 aa29.23■■■□□ 2.27
KRT18-201ENST00000388835 MRPS5P82675 430 aaKnown RBP29.23■■■□□ 2.27
KRT18-201ENST00000388835 ZNF713Q8N859 430 aaPredicted RBP29.23■■■□□ 2.27
KRT18-201ENST00000388835 KCNB2Q92953 911 aa29.23■■■□□ 2.27
KRT18-201ENST00000388835 BRF1Q92994 677 aa29.23■■■□□ 2.27
KRT18-201ENST00000388835 JPH1Q9HDC5 661 aaPredicted RBP29.23■■■□□ 2.27
KRT18-201ENST00000388835 SPTBN5Q9NRC6 3674 aaKnown RBP29.23■■■□□ 2.27
KRT18-201ENST00000388835 FOSP01100 380 aaPredicted RBP29.22■■■□□ 2.27
KRT18-201ENST00000388835 POU3F3P20264 500 aaPredicted RBP29.22■■■□□ 2.27
KRT18-201ENST00000388835 HSPA4P34932 840 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 BLOC1S2Q6QNY1 142 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 GDPD5Q8WTR4 605 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 SMARCAD1Q9H4L7 1026 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 SLC9A2Q9UBY0 812 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 LINC01553A4QN01 128 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 ARP10275 920 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 RCAN1P53805 252 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 GRIK4Q16099 956 aa29.22■■■□□ 2.27
KRT18-201ENST00000388835 IGBP1P78318 339 aa29.21■■■□□ 2.27
KRT18-201ENST00000388835 MKRN4PQ13434 485 aaPredicted RBP29.21■■■□□ 2.27
KRT18-201ENST00000388835 SDF4Q9BRK5 362 aa29.21■■■□□ 2.27
KRT18-201ENST00000388835 TTC28Q96AY4 2481 aa29.2■■■□□ 2.27
KRT18-201ENST00000388835 CEP55Q53EZ4 464 aa29.2■■■□□ 2.26
KRT18-201ENST00000388835 FAM26DQ5JW98 314 aa29.2■■■□□ 2.26
KRT18-201ENST00000388835 JAKMIP3Q5VZ66 844 aa29.2■■■□□ 2.26
KRT18-201ENST00000388835 TGS1Q96RS0 853 aaKnown RBP29.2■■■□□ 2.26
KRT18-201ENST00000388835 PCYT2Q99447 389 aa29.2■■■□□ 2.26
KRT18-201ENST00000388835 TUBE1Q9UJT0 475 aa29.2■■■□□ 2.26
KRT18-201ENST00000388835 INSL6Q9Y581 213 aa29.2■■■□□ 2.26
KRT18-201ENST00000388835 CCDC196A0A1B0GTZ2 297 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 LPXNO60711 386 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 CHRNA1P02708 482 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 ZNF76P36508 570 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 AP3B2Q13367 1082 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 PFKFB3Q16875 520 aaPredicted RBP29.19■■■□□ 2.26
KRT18-201ENST00000388835 GLT8D2Q9H1C3 349 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 SIP14410 1827 aa29.19■■■□□ 2.26
KRT18-201ENST00000388835 UPP2O95045 317 aa29.18■■■□□ 2.26
KRT18-201ENST00000388835 SCG2P13521 617 aa29.18■■■□□ 2.26
KRT18-201ENST00000388835 SREBF1P36956 1147 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms