RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MKNK2Q9HBH9 465 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 MCM8Q9UJA3 840 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 PCDHA4Q9UN74 947 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 KLRG2A4D1S0 409 aaPredicted RBP15.2■□□□□ 0.02
SDC1-202ENST00000381150 ATP2B4P23634 1241 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 BIRC2Q13490 618 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 HEATR3Q7Z4Q2 680 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 SPATS2Q86XZ4 545 aaKnown RBP15.2■□□□□ 0.02
SDC1-202ENST00000381150 ARFGAP2Q8N6H7 521 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 RPGRQ92834 1020 aaKnown RBP15.2■□□□□ 0.02
SDC1-202ENST00000381150 OSBPL7Q9BZF2 842 aa15.2■□□□□ 0.02
SDC1-202ENST00000381150 UFL1O94874 794 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 KIAA0753Q2KHM9 967 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 LETM2Q2VYF4 491 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 PREPLQ4J6C6 727 aaPredicted RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 GKAP1Q5VSY0 366 aaPredicted RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 TBC1D7Q9P0N9 293 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 FOCADQ5VW36 1801 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 ENO4A6NNW6 628 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 DCDC2CA8MYV0 355 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 UPP2O95045 317 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 TSPY3P0CV98 308 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 TSPY8P0CW00 308 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 CALML3P27482 149 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 BTDP43251 543 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 NOVP48745 357 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 ARL6IP4Q66PJ3 421 aaKnown RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 RSRC1Q96IZ7 334 aaKnown RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 DDX47Q9H0S4 455 aaKnown RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 TMEM60Q9H2L4 133 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 THAP9Q9H5L6 903 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 ADAMTS1Q9UHI8 967 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 STK38LQ9Y2H1 464 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 LRRC37AA6NMS7 1700 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 AFF2P51816 1311 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 RASSF10A6NK89 507 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 A6NNZ2 444 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 GCFC2P16383 781 aaKnown RBP15.19■□□□□ 0.02
SDC1-202ENST00000381150 DDR1Q08345 913 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 TUBB8Q3ZCM7 444 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 SPDL1Q96EA4 605 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 PCDHA6Q9UN73 950 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 PCDHA8Q9Y5H6 950 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 CD2APQ9Y5K6 639 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 MYH1P12882 1939 aa15.19■□□□□ 0.02
SDC1-202ENST00000381150 BBOX1O75936 387 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 VIMP08670 466 aaKnown RBP15.18■□□□□ 0.02
SDC1-202ENST00000381150 CDK8P49336 464 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 MEA1Q16626 185 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 IQCKQ8N0W5 287 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
SDC1-202ENST00000381150 DAGLBQ8NCG7 672 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 TBC1D16Q8TBP0 767 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 TBC1D5Q92609 795 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 SGSM3Q96HU1 749 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 VAT1LQ9HCJ6 419 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 GGA1Q9UJY5 639 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 GAKO14976 1311 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 STXBP3O00186 592 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 CTNND1O60716 968 aaKnown RBP15.18■□□□□ 0.02
SDC1-202ENST00000381150 EPS15P42566 896 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 GNAQP50148 359 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 TTI2Q6NXR4 508 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 MAEAQ7L5Y9 396 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 FAM114A1Q8IWE2 563 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 STAMBPL1Q96FJ0 436 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 DUSP9Q99956 384 aaKnown RBP15.18■□□□□ 0.02
SDC1-202ENST00000381150 CPVLQ9H3G5 476 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 NDST4Q9H3R1 872 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 PLCG1P19174 1290 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 TECP42680 631 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 SCTRP47872 440 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 KLHDC7AQ5VTJ3 777 aa15.18■□□□□ 0.02
SDC1-202ENST00000381150 RBM17Q96I25 401 aaKnown RBP15.18■□□□□ 0.02
SDC1-202ENST00000381150 FLT1P17948 1338 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 HMGB1P1B2RPK0 211 aaPredicted RBP15.17■□□□□ 0.02
SDC1-202ENST00000381150 HSD17B3P37058 310 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 POLR2FP61218 127 aaKnown RBP15.17■□□□□ 0.02
SDC1-202ENST00000381150 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 BARHL2Q9NY43 387 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 ATP8A1Q9Y2Q0 1164 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 BICDL2A1A5D9 508 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 POLRMTO00411 1230 aaKnown RBP15.17■□□□□ 0.02
SDC1-202ENST00000381150 KIF4AO95239 1232 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 EPB41P11171 864 aaKnown RBP15.17■□□□□ 0.02
SDC1-202ENST00000381150 TNNC1P63316 161 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 ITGB3BPQ13352 177 aaPredicted RBP15.17■□□□□ 0.02
SDC1-202ENST00000381150 PACSIN1Q9BY11 444 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 FBXL5Q9UKA1 691 aa15.17■□□□□ 0.02
SDC1-202ENST00000381150 RASSF9O75901 435 aa15.16■□□□□ 0.02
SDC1-202ENST00000381150 SATB1Q01826 763 aa15.16■□□□□ 0.02
SDC1-202ENST00000381150 MGARPQ8TDB4 240 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms