RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
SMN2-203ENST00000380743 FRMPD3Q5JV73 1810 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 GSTTP1A0A1W2PQM5 241 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 LAD1O00515 517 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
SMN2-203ENST00000380743 CHMP2AO43633 222 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 MMP3P08254 477 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
SMN2-203ENST00000380743 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 KCNA10Q16322 511 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
SMN2-203ENST00000380743 RNF180Q86T96 592 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 ARRDC4Q8NCT1 418 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
SMN2-203ENST00000380743 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 ELP1O95163 1332 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 EML1O00423 815 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 PPFIA4O75335 1185 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 ATG7O95352 703 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 HOXD8P13378 290 aaPredicted RBP14.28□□□□□ -0.12
SMN2-203ENST00000380743 PRPHP41219 470 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 TECP42680 631 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
SMN2-203ENST00000380743 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
SMN2-203ENST00000380743 KRT76Q01546 638 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 DGKDQ16760 1214 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 ABHD15Q6UXT9 468 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
SMN2-203ENST00000380743 BMP15O95972 392 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 ASGR1P07306 291 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 EN2P19622 333 aaPredicted RBP14.27□□□□□ -0.12
SMN2-203ENST00000380743 MARCKSP29966 332 aaPredicted RBP14.27□□□□□ -0.12
SMN2-203ENST00000380743 TCF7P36402 384 aaPredicted RBP14.27□□□□□ -0.12
SMN2-203ENST00000380743 SLC39A14Q15043 492 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.12
SMN2-203ENST00000380743 ATL3Q6DD88 541 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 SMAP1Q8IYB5 467 aaPredicted RBP14.27□□□□□ -0.12
SMN2-203ENST00000380743 LINC00301Q8NCQ3 95 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 DISC1Q9NRI5 854 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 SAMM50Q9Y512 469 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 PCDHA10Q9Y5I2 948 aa14.27□□□□□ -0.12
SMN2-203ENST00000380743 POTEMA6NI47 508 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 WDR64B1ANS9 1081 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 DNM1LO00429 736 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 MYL3P08590 195 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 ZNF286BP0CG31 522 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMN2-203ENST00000380743 PURAQ00577 322 aaKnown RBP14.26□□□□□ -0.13
SMN2-203ENST00000380743 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
SMN2-203ENST00000380743 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 CXCL17Q6UXB2 119 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 MIER3Q7Z3K6 550 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 PCSK9Q8NBP7 692 aaKnown RBP14.26□□□□□ -0.13
SMN2-203ENST00000380743 PCYT2Q99447 389 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 TSEN34Q9BSV6 310 aaKnown RBP14.26□□□□□ -0.13
SMN2-203ENST00000380743 TCEAL9Q9UHQ7 104 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
SMN2-203ENST00000380743 IGKV6D-21A0A0A0MT36 114 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 CCDC85CA6NKD9 419 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 KBTBD13C9JR72 458 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 ZEB2O60315 1214 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 LGALS2P05162 132 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 SUPT20HL2P0C7V6 817 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 SFNP31947 248 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 JAK3P52333 1124 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 ACLYP53396 1101 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 GRIN1Q05586 938 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 STK38Q15208 465 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 TMEM266Q2M3C6 531 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 MIS18BP1Q6P0N0 1132 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 IGSF22Q8N9C0 903 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 KAT2BQ92831 832 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 C16orf70Q9BSU1 422 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 SPTLC2O15270 562 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 LGR5O75473 907 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 YEATS4O95619 227 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 PSAPP07602 524 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 KRT85P78386 507 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 PDIA5Q14554 519 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 RDM1Q8NG50 284 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 FERMT2Q96AC1 680 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 FBXO2Q9UK22 296 aaPredicted RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 RCOR1Q9UKL0 485 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
SMN2-203ENST00000380743 MORC2Q9Y6X9 1032 aaPredicted RBP14.25□□□□□ -0.13
SMN2-203ENST00000380743 A0A1W2PQ45 241 aaPredicted RBP14.24□□□□□ -0.13
SMN2-203ENST00000380743 A0A1W2PQY0 241 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms