RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 RSPH14Q9UHP6 348 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 HACL1Q9UJ83 578 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 ZNF148Q9UQR1 794 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 PRPSAP2O60256 369 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 HUS1O60921 280 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 GDF11O95390 407 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 PAMP19021 973 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 STX2P32856 288 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 STYK1Q6J9G0 422 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 RHOT2Q8IXI1 618 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 SAMD3Q8N6K7 520 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 STAP1Q9ULZ2 295 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 GPC4O75487 556 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 EPHB1P54762 984 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 POLR2FP61218 127 aaKnown RBP7.76□□□□□ -1.17
CCDC171-201ENST00000380701 CCDC15Q0P6D6 951 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 IFRD2Q12894 506 aaPredicted RBP7.76□□□□□ -1.17
CCDC171-201ENST00000380701 LRMPQ12912 555 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 SEPT6Q14141 434 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 KRT71Q3SY84 523 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 GJA10Q969M2 543 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 MSTO1Q9BUK6 570 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 Q9H521 79 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 FAM96AQ9H5X1 160 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 TRIM45Q9H8W5 580 aaPredicted RBP7.76□□□□□ -1.17
CCDC171-201ENST00000380701 TULP4Q9NRJ4 1543 aa7.76□□□□□ -1.17
CCDC171-201ENST00000380701 DENND3A2RUS2 1198 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 KBTBD13C9JR72 458 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 JAK2O60674 1132 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PRELPP51888 382 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 COPB1P53618 953 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 TFAMQ00059 246 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 STRIP1Q5VSL9 837 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 KIRREL3Q8IZU9 778 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 FAM71BQ8TC56 605 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PBKQ96KB5 322 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 APOL6Q9BWW8 343 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 OGFRQ9NZT2 677 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PVALEFA0A1B0GWK0 134 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 GOLGA8KD6RF30 607 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 AP3B1O00203 1094 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 RGL2O15211 777 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 THOC5Q13769 683 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 RFX6Q8HWS3 928 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 MMP19Q99542 508 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 LBHD1Q9BQE6 289 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 LSG1Q9H089 658 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 VPS18Q9P253 973 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 RWDD2AQ9UIY3 292 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 KCNJ6P48051 423 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 CBX1P83916 185 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 CYP4A11Q02928 519 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PTPN12Q05209 780 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 SNAPC2Q13487 334 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 MTERF2Q49AM1 385 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 CNOT6LQ96LI5 555 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 NUDCD1Q96RS6 583 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 TUBGCP2Q9BSJ2 902 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 KIF9Q9HAQ2 790 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 RNF146Q9NTX7 359 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 ZCCHC11Q5TAX3 1644 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 CHEK2O96017 543 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 MAPK4P31152 587 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 ARHGEF18Q6ZSZ5 1173 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 KLHL7Q8IXQ5 586 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 RYBPQ8N488 228 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PI4K2BQ8TCG2 481 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PPP1R2P1Q96PQ5 205 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 USP28Q96RU2 1077 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 TUBB6Q9BUF5 446 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 SEC31BQ9NQW1 1179 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 KLHL14Q9P2G3 628 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 HPCAL4Q9UM19 191 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 ZHX2Q9Y6X8 837 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 NDUFAB1O14561 156 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 ATP2C2O75185 946 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 MOCS3O95396 460 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 CALB1P05937 261 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 CDC25BP30305 580 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PAPOLAP51003 745 aaKnown RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 MTMR1Q13613 665 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 TRIM72Q6ZMU5 477 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 ZBTB33Q86T24 672 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 SPICE1Q8N0Z3 855 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 TMEM35BQ8NCS4 154 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 RMDN3Q96TC7 470 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PLA2G12BQ9BX93 195 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-201ENST00000380701 PALD1Q9ULE6 856 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 MTMR6Q9Y217 621 aa7.75□□□□□ -1.17
CCDC171-201ENST00000380701 TNPO2O14787 897 aaKnown RBP7.74□□□□□ -1.17
CCDC171-201ENST00000380701 MAGEB2O15479 319 aa7.74□□□□□ -1.17
CCDC171-201ENST00000380701 INHBAP08476 426 aa7.74□□□□□ -1.17
CCDC171-201ENST00000380701 PLA2G4BP0C869 781 aa7.74□□□□□ -1.17
CCDC171-201ENST00000380701 TTC23LQ6PF05 361 aa7.74□□□□□ -1.17
CCDC171-201ENST00000380701 RAET1EQ8TD07 263 aa7.74□□□□□ -1.17
CCDC171-201ENST00000380701 PCDHB8Q9UN66 801 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms