RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 SH2D4AQ9H788 454 aa13.68□□□□□ -0.22
PRPF40B-202ENST00000380281 POTEB3A0JP26 581 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 POTECB2RU33 542 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 HEXIM1O94992 359 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 KLRC1P26715 233 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 RFC4P35249 363 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 POTEBQ6S5H4 581 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 MICALCLQ6ZW33 695 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 MEA1Q16626 185 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 ZBTB10Q96DT7 871 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 PPANQ9NQ55 473 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 E7EVH7 732 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 AKR1B1P15121 316 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 USH1GQ495M9 461 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 ZMYND12Q9H0C1 365 aa13.67□□□□□ -0.22
PRPF40B-202ENST00000380281 TARSL2A2RTX5 802 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 M0R2N6 131 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 KCNK3O14649 394 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 OPA1O60313 960 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 HSF2BPO75031 334 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 ADCY7P51828 1080 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 SNX1Q13596 522 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 PLS1Q14651 629 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 CCDC170Q8IYT3 715 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 PANK4Q9NVE7 773 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 RTCBQ9Y3I0 505 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 DCCP43146 1447 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 A0A087X0T9 212 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 CLIC2O15247 247 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM228BP0C875 321 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 KLHL30Q0D2K2 578 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 TBC1D10BQ4KMP7 808 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 ARMC2Q8NEN0 867 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 WDR66Q8TBY9 1149 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 NOX5Q96PH1 765 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 TSG101Q99816 390 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 EPN3Q9H201 632 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 CCNL1Q9UK58 526 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF40B-202ENST00000380281 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 CEP104O60308 925 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 GRIK3Q13003 919 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 CFAP58Q5T655 872 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 ARMC3Q5W041 872 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 GJB7Q6PEY0 223 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 CCDC121Q6ZUS5 278 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 MYOCDQ8IZQ8 938 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 ZIM3Q96PE6 472 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 SH3BP1Q9Y3L3 701 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 SMIM23A6NLE4 172 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 DNM1LO00429 736 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 SKOR1P84550 965 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 SFMBT2Q5VUG0 894 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 IQCEQ6IPM2 695 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 POTEGQ6S5H5 508 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 NLRP14Q86W24 1093 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 GPBP1Q86WP2 473 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 MYCBPAPQ8TBZ2 947 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 STIM2Q9P246 746 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 DDX25Q9UHL0 483 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 SIK3Q9Y2K2 1263 aa13.65□□□□□ -0.22
PRPF40B-202ENST00000380281 SLC9A1P19634 815 aa13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 COPB2P35606 906 aa13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 GPSM2P81274 684 aa13.65□□□□□ -0.23
PRPF40B-202ENST00000380281 ZKSCAN8Q15776 578 aaPredicted RBP13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms