RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TKFCQ3LXA3 575 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 HERC4Q5GLZ8 1057 aaPredicted RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 CEP135Q66GS9 1140 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 E4F1Q66K89 784 aaPredicted RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 TMEM139Q8IV31 216 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 RBM46Q8TBY0 533 aaKnown RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 PURBQ96QR8 312 aaKnown RBP22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 RMDN3Q96TC7 470 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 MYH11P35749 1972 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 ITIH6Q6UXX5 1313 aa22.07■■□□□ 1.12
PDLIM5-205ENST00000380180 KCNJ6P48051 423 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 UBXN1Q04323 297 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 BAATQ14032 418 aaPredicted RBP22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 PPFIBP1Q86W92 1011 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 FAM114A1Q8IWE2 563 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 MYOCDQ8IZQ8 938 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 PIGOQ8TEQ8 1089 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 C16orf45Q96MC5 204 aaPredicted RBP22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 FGFBP2Q9BYJ0 223 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 JADE2Q9NQC1 790 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 TRMT1Q9NXH9 659 aaKnown RBP22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 HOXC10Q9NYD6 342 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 AKR1B15C9JRZ8 316 aaPredicted RBP22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 CPLX3Q8WVH0 158 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 CNOT6LQ96LI5 555 aaKnown RBP22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 TUBGCP2Q9BSJ2 902 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 ZHX3Q9H4I2 956 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 PKD2L1Q9P0L9 805 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 CSADQ9Y600 493 aa22.06■■□□□ 1.12
PDLIM5-205ENST00000380180 LRRC63Q05C16 580 aa22.05■■□□□ 1.12
PDLIM5-205ENST00000380180 EPHA7Q15375 998 aa22.05■■□□□ 1.12
PDLIM5-205ENST00000380180 BAG1Q99933 345 aaPredicted RBP22.05■■□□□ 1.12
PDLIM5-205ENST00000380180 REEP2Q9BRK0 252 aa22.05■■□□□ 1.12
PDLIM5-205ENST00000380180 PXMP2Q9NR77 195 aa22.05■■□□□ 1.12
PDLIM5-205ENST00000380180 WDR81Q562E7 1941 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 SPDYE16A6NNV3 312 aaPredicted RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 LGALS16A8MUM7 142 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 DDX39AO00148 427 aaKnown RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 ATP2A1O14983 1001 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 DHX15O43143 795 aaKnown RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 MYCLP12524 364 aaPredicted RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 ARHGEF16Q5VV41 709 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 ZNF507Q8TCN5 953 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 PDCD2LQ9BRP1 358 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 AGO4Q9HCK5 861 aaKnown RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.04■■□□□ 1.123e-6■■□□□ 11.9
PDLIM5-205ENST00000380180 ZBTB39O15060 712 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 PRKCSHP14314 528 aaPredicted RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 MUTP22033 750 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 MTMR1Q13613 665 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 MB21D1Q8N884 522 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 L3MBTL3Q96JM7 780 aaPredicted RBP22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 RUSC1Q9BVN2 902 aa22.04■■□□□ 1.12
PDLIM5-205ENST00000380180 PES1O00541 588 aaKnown RBP22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 GYPCP04921 128 aa22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 CASP14P31944 242 aa22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 IREB2P48200 963 aaKnown RBP22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 ITGB3BPQ13352 177 aaPredicted RBP22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 RINT1Q6NUQ1 792 aa22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 USP50Q70EL3 339 aaPredicted RBP22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 TEX13BQ9BXU2 312 aa22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 WRAP73Q9P2S5 460 aaPredicted RBP22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 MYPNQ86TC9 1320 aa22.03■■□□□ 1.12
PDLIM5-205ENST00000380180 STX10O60499 249 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 EPHX2P34913 555 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 MTIF2P46199 727 aaKnown RBP22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 TREML2Q5T2D2 321 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 FOXR2Q6PJQ5 311 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 PANX2Q96RD6 677 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 TSG101Q99816 390 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 B4DLN1 442 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 ARHGAP6O43182 974 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 FGFR1OPO95684 399 aaKnown RBP22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 PLS1Q14651 629 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 SCFD1Q8WVM8 642 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 NACC1Q96RE7 527 aa22.02■■□□□ 1.12
PDLIM5-205ENST00000380180 NKRFO15226 690 aaKnown RBP eCLIP22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 TNNT1P13805 278 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 DNM2P50570 870 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 FXR1P51114 621 aaKnown RBP eCLIP22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 ZCWPW2Q504Y3 356 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 MIER3Q7Z3K6 550 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 BANK1Q8NDB2 785 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 ELP3Q9H9T3 547 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 POLD4Q9HCU8 107 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 LCTP09848 1927 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 A0A1W2PQC6 194 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 RSPH10B2B2RC85 870 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 MFAP3LO75121 409 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 TPM2P07951 284 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 RSPH10BP0C881 870 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 MIIPQ5JXC2 388 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 LRRC55Q6ZSA7 311 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 SFR1Q86XK3 245 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 NELFCDQ8IXH7 590 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 ZC3H15Q8WU90 426 aaKnown RBP22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 CDCA5Q96FF9 252 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 LXNQ9BS40 222 aa22.01■■□□□ 1.11
PDLIM5-205ENST00000380180 NOC4LQ9BVI4 516 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms