RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 KIF5CO60282 957 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
PRNP-201ENST00000379440 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 GIT2Q14161 759 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 MAN2A1Q16706 1144 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 CCDC155Q8N6L0 562 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 EIF2AK1Q9BQI3 630 aaKnown RBP16.45■□□□□ 0.22
PRNP-201ENST00000379440 BCAS3Q9H6U6 928 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 EMILIN3Q9NT22 766 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 TFR2Q9UP52 801 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 MRPL11Q9Y3B7 192 aaKnown RBP16.45■□□□□ 0.22
PRNP-201ENST00000379440 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 SLC26A4O43511 780 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 CHMP2AO43633 222 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 TRAF1Q13077 416 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 SYT2Q8N9I0 419 aaPredicted RBP16.45■□□□□ 0.22
PRNP-201ENST00000379440 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
PRNP-201ENST00000379440 FRMD3A2A2Y4 597 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 TNNT3P45378 269 aaPredicted RBP16.44■□□□□ 0.22
PRNP-201ENST00000379440 CASP5P51878 434 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 ZBED6P86452 979 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 FKBP3Q00688 224 aaKnown RBP16.44■□□□□ 0.22
PRNP-201ENST00000379440 CTTNQ14247 550 aaKnown RBP16.44■□□□□ 0.22
PRNP-201ENST00000379440 SAMD7Q7Z3H4 446 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 RETREG2Q8NC44 543 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 REEP2Q9BRK0 252 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 BHMT2Q9H2M3 363 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 FAM207AQ9NSI2 230 aaPredicted RBP16.44■□□□□ 0.22
PRNP-201ENST00000379440 TRIM10Q9UDY6 481 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 SIK3Q9Y2K2 1263 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 MRFAP1Q9Y605 127 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 PLA2G6O60733 806 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 MEA1Q16626 185 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 MMRN2Q9H8L6 949 aa16.44■□□□□ 0.22
PRNP-201ENST00000379440 RSPH10B2B2RC85 870 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 RSPH10BP0C881 870 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 PTGER2P43116 358 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 SLC35F6Q8N357 371 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 KCTD10Q9H3F6 313 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 PITPNM2Q9BZ72 1349 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
PRNP-201ENST00000379440 TNIP1Q15025 636 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 LRCH2Q5VUJ6 765 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 GPIHBP1Q8IV16 184 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 TANGO6Q9C0B7 1094 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 COL4A3BPQ9Y5P4 624 aa16.43■□□□□ 0.22
PRNP-201ENST00000379440 ZBTB39O15060 712 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 PSMD10O75832 226 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 ARP10275 920 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 SFR1Q86XK3 245 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 TPH2Q8IWU9 490 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 HSD17B14Q9BPX1 270 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 POLR3CQ9BUI4 534 aaPredicted RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 RUSC1Q9BVN2 902 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 CCPG1Q9ULG6 757 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 BCS1LQ9Y276 419 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 ZNF536O15090 1300 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 TADA3O75528 432 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 SLITRK3O94933 977 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 ZNF280AP59817 542 aaPredicted RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 HERVK_113P62684 666 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 TBC1D10BQ4KMP7 808 aaPredicted RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 FIGNQ5HY92 759 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 NHEJ1Q9H9Q4 299 aaPredicted RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 ZNHIT6Q9NWK9 470 aaKnown RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 GUCA1BQ9UMX6 200 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 ABCB11O95342 1321 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 PLEKP08567 350 aaPredicted RBP16.42■□□□□ 0.22
PRNP-201ENST00000379440 POLD1P28340 1107 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 FOXR2Q6PJQ5 311 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 MICALL2Q8IY33 904 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 UBXN4Q92575 508 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
PRNP-201ENST00000379440 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 NFIBO00712 420 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 GMPSP49915 693 aaPredicted RBP16.41■□□□□ 0.22
PRNP-201ENST00000379440 RASSF7Q02833 373 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
PRNP-201ENST00000379440 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 FER1L6Q2WGJ9 1857 aa16.41■□□□□ 0.22
PRNP-201ENST00000379440 ICAM1P05362 532 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms