RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RHOBTB3O94955 611 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 SMARCA1P28370 1054 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 DNA2P51530 1060 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 KCNA1Q09470 495 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 CCDC40Q4G0X9 1142 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 WRNIP1Q96S55 665 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.5
NEDD9-201ENST00000379433 NLRC4Q9NPP4 1024 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 GUCA1BQ9UMX6 200 aa11.96□□□□□ -0.5
NEDD9-201ENST00000379433 GCOM1H8Y6P7 765 aaPredicted RBP11.95□□□□□ -0.5
NEDD9-201ENST00000379433 EML1O00423 815 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 MSH4O15457 936 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 ARHGAP6O43182 974 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 POLR2MP0CAP2 368 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 PPP2R5AQ15172 486 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 ELF2Q15723 593 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 TTC30AQ86WT1 665 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 MORC4Q8TE76 937 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
NEDD9-201ENST00000379433 TPX2Q9ULW0 747 aaKnown RBP11.95□□□□□ -0.5
NEDD9-201ENST00000379433 TMEM150BA6NC51 233 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 H7C1D1 291 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 COQ9O75208 318 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
NEDD9-201ENST00000379433 CYP27A1Q02318 531 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 C16orf87Q6PH81 154 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 RDH13Q8NBN7 331 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 WNK4Q96J92 1243 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 TRAIPQ9BWF2 469 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 VCPKMTQ9H867 229 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 IRAK4Q9NWZ3 460 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 TMX2Q9Y320 296 aa11.95□□□□□ -0.5
NEDD9-201ENST00000379433 CLIC2O15247 247 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ECEL1O95672 775 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ASNSP08243 561 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 COASYQ13057 564 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 E2F5Q15329 346 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 HINFPQ9BQA5 517 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 hCG_1984214I3L0E3 225 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 DYNC1I1O14576 645 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ZRANB2O95218 330 aaKnown RBP eCLIP11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ARP10275 920 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.51e-18■□□□□ 8.2
NEDD9-201ENST00000379433 HMGCS2P54868 508 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 PPP4R3AQ6IN85 833 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ELOA2Q8IYF1 753 aaPredicted RBP11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ZNF713Q8N859 430 aaPredicted RBP11.94□□□□□ -0.5
NEDD9-201ENST00000379433 CHURC1Q8WUH1 139 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 DNM3Q9UQ16 869 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 LUC7L2Q9Y383 392 aaKnown RBP11.94□□□□□ -0.5
NEDD9-201ENST00000379433 MYO3BQ8WXR4 1341 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 GAS7O60861 476 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 MFAP3LO75121 409 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 NAT2P11245 290 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 CCNE1P24864 410 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 CASP5P51878 434 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 TERF1P54274 439 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 GMCL1Q96IK5 515 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 DNAH12Q6ZR08 3092 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 BRCA2P51587 3418 aa11.94□□□□□ -0.5
NEDD9-201ENST00000379433 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 EPS15P42566 896 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
NEDD9-201ENST00000379433 TMEM139Q8IV31 216 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 ZNF710Q8N1W2 664 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 MNS1Q8NEH6 495 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 TRERF1Q96PN7 1200 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 SUFUQ9UMX1 484 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 MYH7BA7E2Y1 1941 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 RBAK-RBAKDNI3L0D1 243 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 GCNT3O95395 438 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 NT5C2P49902 561 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 PRELPP51888 382 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 TNIP1Q15025 636 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 ANKRD13CQ8N6S4 541 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 GMCL1P1Q8NEA9 526 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 TRPM4Q8TD43 1214 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 DYDC2Q96IM9 177 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 C7orf25Q9BPX7 421 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 WDR18Q9BV38 432 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 CARD6Q9BX69 1037 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 ENC1O14682 589 aa11.93□□□□□ -0.5
NEDD9-201ENST00000379433 PLEKP08567 350 aaPredicted RBP11.93□□□□□ -0.5
NEDD9-201ENST00000379433 CCDC175P0C221 793 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms