RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ZBTB9Q96C00 473 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 SMARCAD1Q9H4L7 1026 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 AARS2Q5JTZ9 985 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 EFCAB8A8MWE9 144 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ZNF653Q96CK0 615 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 TRIM54Q9BYV2 358 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 SMARCA1P28370 1054 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 TRIM8Q9BZR9 551 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 NLRC4Q9NPP4 1024 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 SRPRBQ9Y5M8 271 aaKnown RBP12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 CACNA1BQ00975 2339 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 GOLGA8MH3BSY2 632 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ASIC4Q96FT7 647 aa12.07□□□□□ -0.48
PTCHD1-201ENST00000379361 ALCAMQ13740 583 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 APPL2Q8NEU8 664 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 OTULINQ96BN8 352 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 TTC3P53804 2025 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 APBA1Q02410 837 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 MECOMQ03112 1051 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 MTX1Q13505 466 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 ELF2Q15723 593 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 SLFN12LQ6IEE8 588 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 FAM129AQ9BZQ8 928 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 CAPN7Q9Y6W3 813 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 IQANK1A0A1B0GTG1 560 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 IDI1Q13907 227 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 POLA2Q14181 598 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 HABP4Q5JVS0 413 aaKnown RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 MEIS3Q99687 375 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 APOA4P06727 396 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 CCDC85BQ15834 202 aaPredicted RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 PPP6R3Q5H9R7 873 aaPredicted RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 SLF1Q9BQI6 1058 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 PSMD2Q13200 908 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 LRRC8BQ6P9F7 803 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 MAN1C1Q9NR34 630 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 GCNT4Q9P109 453 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 DNAJC6O75061 913 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 IMPDH2P12268 514 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 CTSWP56202 376 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 PPHLN1Q8NEY8 458 aaKnown RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 C6orf203Q9P0P8 240 aaPredicted RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 KDM1AO60341 852 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 LBRQ14739 615 aaKnown RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 RBBP7Q16576 425 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 TMEM259Q4ZIN3 620 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 EXT2Q93063 718 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 ABTB1Q969K4 478 aaPredicted RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 SF3A3Q12874 501 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 DIS3L2Q8IYB7 885 aaKnown RBP12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 BLZF1Q9H2G9 400 aa12.06□□□□□ -0.48
PTCHD1-201ENST00000379361 APOA1P02647 267 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 OR8K1Q8NGG5 319 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 FOPNLQ96NB1 174 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 COPRSQ9NQ92 184 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 PAPOLBQ9NRJ5 636 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 GOLGA8IPA6NC78 632 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 RNMTO43148 476 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 HNRNPRO43390 633 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 TFAMQ00059 246 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 MAML1Q92585 1016 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 TMEM206Q9H813 350 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 SP110Q9HB58 689 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 VCPP55072 806 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 ZNF532Q9HCE3 1301 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 TCP1P17987 556 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 PKN3Q6P5Z2 889 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 MFN1Q8IWA4 741 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 ULK4Q96C45 1275 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 ACTR5Q9H9F9 607 aaPredicted RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 FOXD4Q12950 439 aaPredicted RBP12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 TMED1Q13445 227 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 KMT5AQ9NQR1 393 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 KIAA0586Q9BVV6 1533 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 CABIN1Q9Y6J0 2220 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 H0YC42 278 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 ACCSQ96QU6 501 aa12.05□□□□□ -0.48
PTCHD1-201ENST00000379361 PRPF4O43172 522 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 ZBED1O96006 694 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 DCUN1D1Q96GG9 259 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms