RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 UBLCP1Q8WVY7 318 aaPredicted RBP23.15■■□□□ 1.3
SKI-201ENST00000378536 TAF6LQ9Y6J9 622 aa23.15■■□□□ 1.3
SKI-201ENST00000378536 POTEB3A0JP26 581 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 POTECB2RU33 542 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 P4HBP07237 508 aaKnown RBP23.14■■□□□ 1.3
SKI-201ENST00000378536 POTEBQ6S5H4 581 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 PADI6Q6TGC4 694 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 PCDHB4Q9Y5E5 795 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 SAR1BQ9Y6B6 198 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 STAM2O75886 525 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 CFAP58Q5T655 872 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 SLC4A9Q96Q91 983 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 GDAQ9Y2T3 454 aa23.14■■□□□ 1.3
SKI-201ENST00000378536 POLR2BP30876 1174 aaKnown RBP23.14■■□□□ 1.29
SKI-201ENST00000378536 IFT20Q8IY31 132 aa23.14■■□□□ 1.29
SKI-201ENST00000378536 PAIP2Q9BPZ3 127 aaKnown RBP23.14■■□□□ 1.29
SKI-201ENST00000378536 FAM169AQ9Y6X4 670 aa23.14■■□□□ 1.29
SKI-201ENST00000378536 RIOK3O14730 519 aaKnown RBP23.14■■□□□ 1.29
SKI-201ENST00000378536 NSFP46459 744 aaKnown RBP23.14■■□□□ 1.29
SKI-201ENST00000378536 KLHL7Q8IXQ5 586 aa23.14■■□□□ 1.29
SKI-201ENST00000378536 NLRP4Q96MN2 994 aa23.14■■□□□ 1.29
SKI-201ENST00000378536 ZSCAN20P17040 1043 aaPredicted RBP23.14■■□□□ 1.29
SKI-201ENST00000378536 ZDHHC15Q96MV8 337 aa23.14■■□□□ 1.29
SKI-201ENST00000378536 ZNF302Q9NR11 478 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 SMIM23A6NLE4 172 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 MYL3P08590 195 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 IL1R1P14778 569 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 QARSP47897 775 aaKnown RBP23.13■■□□□ 1.29
SKI-201ENST00000378536 PPP1R16BQ96T49 567 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 GCNT4Q9P109 453 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 NUB1Q9Y5A7 615 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 PVALEFA0A1B0GWK0 134 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 BUB1O43683 1085 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 U2AF2P26368 475 aaKnown RBP eCLIP23.13■■□□□ 1.29
SKI-201ENST00000378536 SLFN12LQ6IEE8 588 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 HDXQ7Z353 690 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 SENP2Q9HC62 589 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 CD2APQ9Y5K6 639 aa23.13■■□□□ 1.29
SKI-201ENST00000378536 CTNND1O60716 968 aaKnown RBP23.13■■□□□ 1.29
SKI-201ENST00000378536 TFAMQ00059 246 aaKnown RBP23.13■■□□□ 1.29
SKI-201ENST00000378536 RIOK1Q9BRS2 568 aaKnown RBP23.13■■□□□ 1.29
SKI-201ENST00000378536 TLDC2A0PJX2 215 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 TCP11X2Q5H9J9 407 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 ABI1Q8IZP0 508 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 PSMD1Q99460 953 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 FAM107BQ9H098 131 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 PRR12Q9ULL5 1215 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 PRAMEF18Q5VWM3 479 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 TEX13BQ9BXU2 312 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 ASIC3Q9UHC3 531 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 SFR1Q86XK3 245 aa23.12■■□□□ 1.29
SKI-201ENST00000378536 MXI1P50539 228 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 SURF1Q15526 300 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 LONRF2Q1L5Z9 754 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 CCDC105Q8IYK2 499 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 MSTO1Q9BUK6 570 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 STIM2Q9P246 746 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 NDST4Q9H3R1 872 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 CEP55Q53EZ4 464 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 RNF187Q5TA31 235 aaPredicted RBP23.11■■□□□ 1.29
SKI-201ENST00000378536 POTEFA5A3E0 1075 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 POTEIP0CG38 1075 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 CASP1P29466 404 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 HADHQ16836 314 aaKnown RBP23.11■■□□□ 1.29
SKI-201ENST00000378536 POTEGQ6S5H5 508 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 POTEEQ6S8J3 1075 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 PRMT6Q96LA8 375 aaPredicted RBP23.11■■□□□ 1.29
SKI-201ENST00000378536 RTFDC1Q9BY42 306 aaPredicted RBP23.11■■□□□ 1.29
SKI-201ENST00000378536 TRIM31Q9BZY9 425 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 GABBR1Q9UBS5 961 aa23.11■■□□□ 1.29
SKI-201ENST00000378536 SCAF8Q9UPN6 1271 aaKnown RBP23.11■■□□□ 1.29
SKI-201ENST00000378536 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 PP2D1A8MPX8 630 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 SMARCA1P28370 1054 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 TKFCQ3LXA3 575 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 SWSAP1Q6NVH7 229 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 HYOU1Q9Y4L1 999 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 PSMC5P62195 406 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 RAB20Q9NX57 234 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 CAPN9O14815 690 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 SELENOSQ9BQE4 189 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 ANKRD26Q9UPS8 1709 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 ASB14A6NK59 587 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 OSTNP61366 133 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 SHC4Q6S5L8 630 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 LXNQ9BS40 222 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 FAM49AQ9H0Q0 323 aaPredicted RBP23.1■■□□□ 1.29
SKI-201ENST00000378536 SNAPC2Q13487 334 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 KIAA1524Q8TCG1 905 aa23.1■■□□□ 1.29
SKI-201ENST00000378536 COASYQ13057 564 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 PTPN21Q16825 1174 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 VSTM4Q8IW00 320 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 RPGRIP1Q96KN7 1286 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 EIF2AK1Q9BQI3 630 aaKnown RBP23.09■■□□□ 1.29
SKI-201ENST00000378536 STXBP3O00186 592 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 KCNK3O14649 394 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 CNTNAP5Q8WYK1 1306 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 SALL3Q9BXA9 1300 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 CCDC63Q8NA47 563 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms