RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SEPT1Q8WYJ6 367 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 GLG1Q92896 1179 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 TSEN34Q9BSV6 310 aaKnown RBP13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 KCNMB3Q9NPA1 279 aa13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 RANBP2P49792 3224 aaKnown RBP13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 TNRC18O15417 2968 aaPredicted RBP13.25□□□□□ -0.29
DEPDC4-202ENST00000378244 GSTTP1A0A1W2PQM5 241 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 LGALS2P05162 132 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 NAP1L4Q99733 375 aaKnown RBP13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 FTOQ9C0B1 505 aaKnown RBP eCLIP13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 POLR3EQ9NVU0 708 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 NFASCO94856 1347 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 BACH1O14867 736 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 PSMD10O75832 226 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 NKX3-2P78367 333 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 LRRC26Q2I0M4 334 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 RILPL1Q5EBL4 403 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 KAT2BQ92831 832 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 C16orf70Q9BSU1 422 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 MTG1Q9BT17 334 aaPredicted RBP13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 UNC45AQ9H3U1 944 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 PCDHA12Q9UN75 941 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 ATP11BQ9Y2G3 1177 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 RBM19Q9Y4C8 960 aaKnown RBP13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 FRMPD3Q5JV73 1810 aa13.24□□□□□ -0.29
DEPDC4-202ENST00000378244 H3BRB1 525 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 PQBP1O60828 265 aaKnown RBP13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 TRAPPC10P48553 1259 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 RESTQ13127 1097 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 PTGDRQ13258 359 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 ITGA7Q13683 1181 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 KIAA0753Q2KHM9 967 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 SLC39A5Q6ZMH5 540 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 DPF3Q92784 378 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 RIT2Q99578 217 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 TUT1Q9H6E5 874 aaKnown RBP13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 TTC12Q9H892 705 aaPredicted RBP13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 ELP1O95163 1332 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 BRAPQ7Z569 592 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 AZI2Q9H6S1 392 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
DEPDC4-202ENST00000378244 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 KRT76Q01546 638 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 CCDC60Q8IWA6 550 aaPredicted RBP13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 FAM20AQ96MK3 541 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 RNPEPQ9H4A4 650 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 EML1O00423 815 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 F2P00734 622 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 TECP42680 631 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 MFSD10Q14728 455 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 ABHD15Q6UXT9 468 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 MTMR9Q96QG7 549 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 PCYT2Q99447 389 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 PCDHA10Q9Y5I2 948 aa13.22□□□□□ -0.29
DEPDC4-202ENST00000378244 POTEMA6NI47 508 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 WDR64B1ANS9 1081 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 TBX3O15119 743 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 KPNA6O60684 536 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 CABYRO75952 493 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 OR52Z1P0C646 297 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 PSEN2P49810 448 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 STAT5BP51692 787 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 ZNF746Q6NUN9 644 aaPredicted RBP13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 CKAP2LQ8IYA6 745 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 C7orf31Q8N865 590 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 GABBR1Q9UBS5 961 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
DEPDC4-202ENST00000378244 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 RBAK-RBAKDNI3L0D1 243 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 SUPT20HL2P0C7V6 817 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 RTP1P59025 263 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 CYP4A11Q02928 519 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 TLE2Q04725 743 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 PDXDC2PQ6P474 469 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 BANK1Q8NDB2 785 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 HTATIP2Q9BUP3 242 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 ZNF302Q9NR11 478 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 CLIC4Q9Y696 253 aa13.21□□□□□ -0.3
DEPDC4-202ENST00000378244 LAMA2P24043 3122 aaKnown RBP13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 PDE4DIPQ5VU43 2346 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms