RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 LAMA2P24043 3122 aaKnown RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 STK36Q9NRP7 1315 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 LRRC37AA6NMS7 1700 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 HNRNPDLO14979 420 aaKnown RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 SLU7O95391 586 aaKnown RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 CALCAP01258 141 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 KLHL30Q0D2K2 578 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 MTMR1Q13613 665 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 FAM47CQ5HY64 1035 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 FAM182AQ5T1J6 154 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 ZNF658Q5TYW1 1059 aaPredicted RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 TMED8Q6PL24 325 aaPredicted RBP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 TMCO3Q6UWJ1 677 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 SESTD1Q86VW0 696 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.94□□□□□ -0.98
CKAP2-203ENST00000378037 WNK4Q96J92 1243 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 ZDHHC15Q96MV8 337 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 SH2D4AQ9H788 454 aa8.94□□□□□ -0.98
CKAP2-203ENST00000378037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.94□□□□□ -0.982e-7■□□□□ 11.3
CKAP2-203ENST00000378037 NCK2O43639 380 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 GFPT2O94808 682 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 PCP11498 1178 aaKnown RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 KRT13P13646 458 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 MAGEA1P43355 309 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 GCLMP48507 274 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 FUT2Q10981 343 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 TCP11X2Q5H9J9 407 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 KIAA1755Q5JYT7 1200 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 TRIM50Q86XT4 487 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 CLMNQ96JQ2 1002 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 LXNQ9BS40 222 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 FAM49AQ9H0Q0 323 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 ARGLU1Q9NWB6 273 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 EHD2Q9NZN4 543 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 ARMCX3Q9UH62 379 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 MRPL11Q9Y3B7 192 aaKnown RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 BICDL2A1A5D9 508 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 HGSO14964 777 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 PLSCR1O15162 318 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 RGL2O15211 777 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 HOXA10P31260 410 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 COASYQ13057 564 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 MTM1Q13496 603 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 E4F1Q66K89 784 aaPredicted RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 HHIPL2Q6UWX4 724 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 SCARA5Q6ZMJ2 495 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 TAX1BP1Q86VP1 789 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 VSTM4Q8IW00 320 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 IL31RAQ8NI17 732 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 U2AF1L4Q8WU68 220 aaKnown RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 IFIH1Q9BYX4 1025 aaKnown RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 EHMT1Q9H9B1 1298 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 XRCC5P13010 732 aaKnown RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 SLC7A5Q01650 507 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 COG2Q14746 738 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 NCAPHQ15003 741 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 ECM1Q16610 540 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 CNGA4Q8IV77 575 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 TMEM143Q96AN5 459 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 MTRQ99707 1265 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 EIF2AK1Q9BQI3 630 aaKnown RBP8.93□□□□□ -0.98
CKAP2-203ENST00000378037 ZMYND12Q9H0C1 365 aa8.93□□□□□ -0.98
CKAP2-203ENST00000378037 CTAGE9A4FU28 777 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 INO80B-WBP1J3KQ70 363 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 EML1O00423 815 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 CD58P19256 250 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 CNTN2Q02246 1040 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 GFPT1Q06210 699 aaPredicted RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 MUM1L1Q5H9M0 696 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 CATSPER3Q86XQ3 398 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 OR8K1Q8NGG5 319 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 TAF4BQ92750 862 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 REEP2Q9BRK0 252 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 INO80BQ9C086 356 aaPredicted RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 ST7Q9NRC1 585 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 GABBR1Q9UBS5 961 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 FRMD4BQ9Y2L6 1034 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 IVNS1ABPQ9Y6Y0 642 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 PIK3R2O00459 728 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 ARHGAP6O43182 974 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 CYLC1P35663 651 aaPredicted RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 EHHADHQ08426 723 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 HSP90B2PQ58FF3 399 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 FAM114A1Q8IWE2 563 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 THNSL1Q8IYQ7 743 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 ENOX1Q8TC92 643 aaKnown RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 POMGNT1Q8WZA1 660 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 RUFY1Q96T51 708 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 TEKT3Q9BXF9 490 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 SPZ1Q9BXG8 430 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 MOCS3O95396 460 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 CYP2C8P10632 490 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 EPB41P11171 864 aaKnown RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 SMAD1Q15797 465 aaKnown RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 C9orf131Q5VYM1 1079 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 CCDC25Q86WR0 208 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 PASD1Q8IV76 773 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
CKAP2-203ENST00000378037 RUSC1Q9BVN2 902 aa8.92□□□□□ -0.98
CKAP2-203ENST00000378037 ACP6Q9NPH0 428 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms