RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SCFD1Q8WVM8 642 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 RIOX1Q9H6W3 641 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 KIAA1024Q9UPX6 916 aa19.76■□□□□ 0.75
GNE-201ENST00000377902 PPP1R11O60927 126 aaPredicted RBP19.75■□□□□ 0.75
GNE-201ENST00000377902 ASIC2Q16515 512 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 HERC4Q5GLZ8 1057 aaPredicted RBP19.75■□□□□ 0.75
GNE-201ENST00000377902 TEX11Q8IYF3 940 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 GPATCH11Q8N954 259 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 WHAMMQ8TF30 809 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 SYN2Q92777 582 aaPredicted RBP19.75■□□□□ 0.75
GNE-201ENST00000377902 DDX47Q9H0S4 455 aaKnown RBP19.75■□□□□ 0.75
GNE-201ENST00000377902 GANQ9H2C0 597 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 TAF1DQ9H5J8 278 aaPredicted RBP19.75■□□□□ 0.75
GNE-201ENST00000377902 DDX25Q9UHL0 483 aaKnown RBP19.75■□□□□ 0.75
GNE-201ENST00000377902 TMEM59LQ9UK28 342 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 MARCH6O60337 910 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 PPP4CP60510 307 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 KCNH2Q12809 1159 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 ADAM9Q13443 819 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 RPS6KA1Q15418 735 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 RAB34Q9BZG1 259 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 TMBIM4Q9HC24 238 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 PCDHA2Q9Y5H9 948 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
GNE-201ENST00000377902 MYBP10242 640 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 ITGA4P13612 1032 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 HSPA9P38646 679 aaKnown RBP19.74■□□□□ 0.75
GNE-201ENST00000377902 CASP5P51878 434 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 AMIGO3Q86WK7 504 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 MYH4Q9Y623 1939 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 DDX60LQ5H9U9 1706 aaKnown RBP19.74■□□□□ 0.75
GNE-201ENST00000377902 LOC102724159A0A0B4J2E5 919 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 POTEB3A0JP26 581 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 POTECB2RU33 542 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 SLC16A2P36021 539 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 EPS15P42566 896 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 PWP2Q15269 919 aaKnown RBP19.74■□□□□ 0.75
GNE-201ENST00000377902 TTBK2Q6IQ55 1244 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 POTEBQ6S5H4 581 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 TAF4BQ92750 862 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 AIPL1Q9NZN9 384 aa19.74■□□□□ 0.75
GNE-201ENST00000377902 MAST2Q6P0Q8 1798 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 ESYT2A0FGR8 921 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 DCDC2CA8MYV0 355 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 H0YGN5 161 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 KIF4AO95239 1232 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 TNNC1P63316 161 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 SPRED3Q2MJR0 410 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 IRF2BP2Q7Z5L9 587 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 NUCKS1Q9H1E3 243 aaKnown RBP19.73■□□□□ 0.75
GNE-201ENST00000377902 ISCUQ9H1K1 167 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 KCTD10Q9H3F6 313 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 PCDHA12Q9UN75 941 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 NFS1Q9Y697 457 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 A6NNZ2 444 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 STAT3P40763 770 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 TUBB8Q3ZCM7 444 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 CHADLQ6NUI6 762 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 CEP89Q96ST8 783 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 BCAS3Q9H6U6 928 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 LUC7LQ9NQ29 371 aaKnown RBP19.73■□□□□ 0.75
GNE-201ENST00000377902 EMILIN3Q9NT22 766 aa19.73■□□□□ 0.75
GNE-201ENST00000377902 NAV1Q8NEY1 1877 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 HMGB1P1B2RPK0 211 aaPredicted RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 SART1O43290 800 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 CTNNA1P35221 906 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 ZNF844Q08AG5 666 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 QPCTQ16769 361 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 EMC10Q5UCC4 262 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 GPBP1Q86WP2 473 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 METTL13Q8N6R0 699 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 RBM46Q8TBY0 533 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 CD248Q9HCU0 757 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 AMACRQ9UHK6 382 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 AJAP1Q9UKB5 411 aaPredicted RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 TMCO5BA8MYB1 307 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 FSBPO95073 299 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 PLA2G4BP0C869 781 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 GSTO1P78417 241 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 SF3B2Q13435 895 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 SWT1Q5T5J6 900 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 SCFD2Q8WU76 684 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 CELF4Q9BZC1 486 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 ZNF287Q9HBT7 754 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 CNOT8Q9UFF9 292 aaKnown RBP19.72■□□□□ 0.75
GNE-201ENST00000377902 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
GNE-201ENST00000377902 GOLGB1Q14789 3259 aaKnown RBP19.71■□□□□ 0.75
GNE-201ENST00000377902 GCOM1H8Y6P7 765 aaPredicted RBP19.71■□□□□ 0.75
GNE-201ENST00000377902 FAM107AO95990 144 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 MYZAPP0CAP1 466 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 SLURP2P0DP57 97 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 GJB7Q6PEY0 223 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 UBLCP1Q8WVY7 318 aaPredicted RBP19.71■□□□□ 0.75
GNE-201ENST00000377902 YY1AP1Q9H869 796 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 PLCB1Q9NQ66 1216 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 FBXL5Q9UKA1 691 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 DAPK3O43293 454 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 DPY19L2P1Q6NXN4 242 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 CYFIP2Q96F07 1278 aa19.71■□□□□ 0.75
GNE-201ENST00000377902 CEP63Q96MT8 703 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms