RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 FAM83BQ5T0W9 1011 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 DPP8Q6V1X1 898 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ARHGAP27Q6ZUM4 889 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 NOA1Q8NC60 698 aaKnown RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ZNF446Q9NWS9 450 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 LEMD3Q9Y2U8 911 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ADAMTS13Q76LX8 1427 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 NWD1Q149M9 1564 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 K7ENM7 598 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 KIF3CO14782 793 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 HGSO14964 777 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 GFPT2O94808 682 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 MAP7Q14244 749 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 PDIA6Q15084 440 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 TRIM42Q8IWZ5 723 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 BARHL2Q9NY43 387 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ZNF185O15231 689 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 FGGP02679 453 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 NR1H3Q13133 447 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 SGO2Q562F6 1265 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 GEMIN8Q9NWZ8 242 aaKnown RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ANAPC5Q9UJX4 755 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 SMIM24O75264 130 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 BPIFB4P59827 614 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ERVK-24P63145 666 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 SF3A3Q12874 501 aaKnown RBP eCLIP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 AOC3Q16853 763 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 CDKAL1Q5VV42 579 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 PALM2Q8IXS6 379 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 SYN2Q92777 582 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-202ENST00000377865 ZBTB21Q9ULJ3 1066 aa9.51□□□□□ -0.89
PCDH9-202ENST00000377865 MON2Q7Z3U7 1717 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 H0YCG3 227 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 MAPK13O15264 365 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 YWHAEP62258 255 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 MECOMQ03112 1051 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 COASYQ13057 564 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TRPC3Q13507 836 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ALCAMQ13740 583 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 MESDQ14696 234 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 KRT26Q7Z3Y9 468 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 CCT8L2Q96SF2 557 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TEKT3Q9BXF9 490 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 BSDC1Q9NW68 430 aaPredicted RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 NOC2LQ9Y3T9 749 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 GNPATO15228 680 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TTLL1O95922 423 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 SCARF1Q14162 830 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 DCUN1D2Q6PH85 259 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TRMT1LQ7Z2T5 733 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 STAG2Q8N3U4 1231 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 GIMAP8Q8ND71 665 aaPredicted RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 UHMK1Q8TAS1 419 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 MRRFQ96E11 262 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 Q9H521 79 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 BATF3Q9NR55 127 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 PTPN22Q9Y2R2 807 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 MAP2K7O14733 419 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 RPS6KA5O75582 802 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 CHRNA3P32297 505 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 LSP1P33241 339 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 AARSP49588 968 aaKnown RBP eCLIP9.5□□□□□ -0.893e-6■■■■■ 61.8
PCDH9-202ENST00000377865 GUCY1A3Q02108 690 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 FBXO11Q86XK2 927 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ELAC2Q9BQ52 826 aaKnown RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 PNMA6FA0A0J9YX94 578 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 RFX1P22670 979 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 USH1GQ495M9 461 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 MIER3Q7Z3K6 550 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TBC1D1Q86TI0 1168 aaPredicted RBP9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ERGIC2Q96RQ1 377 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 CXorf56Q9H5V9 222 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 TMEM206Q9H813 350 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 C1orf112Q9NSG2 853 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 ASAP1Q9ULH1 1129 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 USH1CQ9Y6N9 552 aa9.5□□□□□ -0.89
PCDH9-202ENST00000377865 FAM237AA0A1B0GTK4 181 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 LRRIQ3A6PVS8 624 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 PTGISQ16647 500 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 RSAD2Q8WXG1 361 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 AZI2Q9H6S1 392 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ABCB11O95342 1321 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 PLEKHG2Q9H7P9 1386 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 CSF1RP07333 972 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 HNRNPH1P31943 449 aaKnown RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 SNX16P57768 344 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms