RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ANKRD20A3Q5VUR7 823 aa20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 UHMK1Q8TAS1 419 aaKnown RBP20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 HSPA6P17066 643 aa20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 HOXA13P31271 388 aaPredicted RBP20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ATP2C1P98194 919 aaPredicted RBP20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 LMNB2Q03252 620 aa20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 MASTLQ96GX5 879 aa20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PCDHB4Q9Y5E5 795 aa20.31■□□□□ 0.84
CNTNAP3B-203ENST00000377561 POTEMA6NI47 508 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 TROVE2P10155 538 aaKnown RBP eCLIP20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PCK1P35558 622 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 GADL1Q6ZQY3 521 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CEP95Q96GE4 821 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CEP170P1Q96L14 293 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SPC25Q9HBM1 224 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SLC5A4Q9NY91 659 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SPOUT1Q5T280 376 aaKnown RBP20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 UBE2TQ9NPD8 197 aaPredicted RBP20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SARNPP82979 210 aaKnown RBP20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 RAD54LQ92698 747 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 MMS19Q96T76 1030 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 RNF8O76064 485 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 MAPK4P31152 587 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SCYL2Q6P3W7 929 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 NUF2Q9BZD4 464 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CAPN7Q9Y6W3 813 aa20.3■□□□□ 0.84
CNTNAP3B-203ENST00000377561 AGLP35573 1532 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 MXI1P50539 228 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 RASSF2P50749 326 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CASP8Q14790 479 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ATP2A3Q93084 1043 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 HAUS1Q96CS2 278 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 IL25Q9H293 177 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ABCB6Q9NP58 842 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 FRMPD1Q5SYB0 1578 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PNMA6AP0CW24 399 aaPredicted RBP20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 MIS18BP1Q6P0N0 1132 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ADRA2BP18089 450 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 TFDP1Q14186 410 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PPP1R2P3Q6NXS1 205 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 HESX1Q9UBX0 185 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ADAMTS1Q9UHI8 967 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ALKBH5Q6P6C2 394 aaKnown RBP20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 LMNTD2Q8IXW0 634 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 MXD3Q9BW11 206 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CEP72Q9P209 647 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 FBXO2Q9UK22 296 aaPredicted RBP20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PCDHA6Q9UN73 950 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PCDHA8Q9Y5H6 950 aa20.29■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CCND2P30279 289 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 GUCY1A2P33402 732 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CRKP46108 304 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CLNS1AP54105 237 aaKnown RBP20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 TXNRD1Q16881 649 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 BSPRYQ5W0U4 402 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 SEPT14Q6ZU15 432 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 EXOC4Q96A65 974 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PTPN22Q9Y2R2 807 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 TMOD1P28289 359 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 RAD17O75943 681 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CHGBP05060 677 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 KAZNQ674X7 775 aa20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CASQ2O14958 399 aaPredicted RBP20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 FOXN1O15353 648 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 RFX1P22670 979 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PDIA6Q15084 440 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 JPH2Q9BR39 696 aaPredicted RBP20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 GH2P01242 217 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 CCT5P48643 541 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 WHAMMQ8TF30 809 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 USP27XA6NNY8 438 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ALS2CLQ60I27 953 aa20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 PRPF31Q8WWY3 499 aaKnown RBP20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
CNTNAP3B-203ENST00000377561 ANO9A1A5B4 782 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 MAP7Q14244 749 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 IQCB1Q15051 598 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 SNAP25P60880 206 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 TBC1D10BQ4KMP7 808 aaPredicted RBP20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 TTC19Q6DKK2 380 aaPredicted RBP20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 SULF1Q8IWU6 871 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 VCXQ9H320 206 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 BAIAP2L1Q9UHR4 511 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 CD2APQ9Y5K6 639 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 TEX33O43247 280 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 MMP10P09238 476 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 MAP2K2P36507 400 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 PLTPP55058 493 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 NEDD1Q8NHV4 660 aa20.26■□□□□ 0.83
CNTNAP3B-203ENST00000377561 ADGRG1Q9Y653 693 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms