RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	KDM3A	Q9Y4C1	1321 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	ARFGEF1	Q9Y6D6	1849 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	PIK3CD	O00329	1044 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	PSMA7	O14818	248 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	SARS	P49591	514 aa	Known RBP	12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	PAK1	Q13153	545 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	CTTN	Q14247	550 aa	Known RBP	12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	SH3RF1	Q7Z6J0	888 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	GPBP1	Q86WP2	473 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	TEX13B	Q9BXU2	312 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	CBFA2T2	O43439	604 aa		12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	AR	P10275	920 aa		12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	CALR	P27797	417 aa	Known RBP	12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	SRL	Q86TD4	932 aa		12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	ERO1B	Q86YB8	467 aa		12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	LRRC27	Q9C0I9	530 aa		12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	STK17A	Q9UEE5	414 aa		12.96	□□□□□ -0.34
LMO7-204	ENST00000377499	SMCHD1	A6NHR9	2005 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	IPO5	O00410	1097 aa	Known RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	IKBKB	O14920	756 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	KIF1C	O43896	1103 aa	Known RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	CD44	P16070	742 aa	Known RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	CATSPERG	Q6ZRH7	1159 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	RAD54L	Q92698	747 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	OPTN	Q96CV9	577 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	PNMA5	Q96PV4	448 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	TRIM9	Q9C026	710 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	GREB1L	Q9C091	1923 aa	Predicted RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	PLA2G4B	P0C869	781 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	FDX1	P10109	184 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	TMEM132B	Q14DG7	1078 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	KCNK18	Q7Z418	384 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	PIGO	Q8TEQ8	1089 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	ZC3H15	Q8WU90	426 aa	Known RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	DDX12P	Q92771	950 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	BPIFA3	Q9BQP9	254 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	TEKT3	Q9BXF9	490 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	WDR11	Q9BZH6	1224 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	MED4	Q9NPJ6	270 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	COL20A1	Q9P218	1284 aa		12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.95	□□□□□ -0.34
LMO7-204	ENST00000377499	PPP1R12A	O14974	1030 aa	Predicted RBP	12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	PRCP	P42785	496 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	FILIP1L	Q4L180	1135 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	ARMCX6	Q7L4S7	300 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	KIAA1524	Q8TCG1	905 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MAGEF1	Q9HAY2	307 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	KCNMB3	Q9NPA1	279 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	KBTBD4	Q9NVX7	518 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	PNMA2	Q9UL42	364 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MYMK	A6NI61	221 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MED24	O75448	989 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MTMR1	Q13613	665 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	LRRC41	Q15345	812 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499		Q4G0T1	1027 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MOXD1	Q6UVY6	613 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	IL31RA	Q8NI17	732 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	CLEC4D	Q8WXI8	215 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	ACAD9	Q9H845	621 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	FCER1A	P12319	257 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	CYP3A7	P24462	503 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	ECM1	Q16610	540 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	NT5DC1	Q5TFE4	455 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	CNNM4	Q6P4Q7	775 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MAEA	Q7L5Y9	396 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	MIER3	Q7Z3K6	550 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	CATSPER3	Q86XQ3	398 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	SPTLC3	Q9NUV7	552 aa		12.94	□□□□□ -0.34
LMO7-204	ENST00000377499	NPHP3-ACAD11	A0A0J9YXS1	232 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	TRIM49B	A6NDI0	452 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	NRDC	O43847	1150 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	ERCC3	P19447	782 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	ERCC5	P28715	1186 aa	Predicted RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	NCAPH	Q15003	741 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	ETNPPL	Q8TBG4	499 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	ENOX1	Q8TC92	643 aa	Known RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	DYDC2	Q96IM9	177 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	EIF2AK1	Q9BQI3	630 aa	Known RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	MXRA8	Q9BRK3	442 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	BHMT2	Q9H2M3	363 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	TBX3	O15119	743 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	SPATA1	Q5VX52	437 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	LRRC15	Q8TF66	581 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	SRRT	Q9BXP5	876 aa	Known RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	KCNH7	Q9NS40	1196 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	BLOC1S4	Q9NUP1	217 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	PPAT	Q06203	517 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	GRM1	Q13255	1194 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	NOL9	Q5SY16	702 aa	Known RBP	12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	CCDC65	Q8IXS2	484 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	CPLX3	Q8WVH0	158 aa		12.93	□□□□□ -0.34
LMO7-204	ENST00000377499	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms