RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 RNF149Q8NC42 400 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 GOLGA1Q92805 767 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 TMEM143Q96AN5 459 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 FAM167AQ96KS9 214 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 EIF2AK1Q9BQI3 630 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 RNF208Q9H0X6 261 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 KNDC1Q76NI1 1749 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 STK36Q9NRP7 1315 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ALDH1A1P00352 501 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 CNTN2Q02246 1040 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 MORC3Q14149 939 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 FKBP1CQ5VVH2 108 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ILDR2Q71H61 639 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 KIF18AQ8NI77 898 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ACCSQ96QU6 501 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ATP6V0A4Q9HBG4 840 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 KCNH7Q9NS40 1196 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 C1orf112Q9NSG2 853 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 A0A1W2PQ27 194 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 A0A1W2PQ64 194 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 A0A1W2PQD8 194 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 STXBP3O00186 592 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 GH1P01241 217 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 BCRP11274 1271 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 P4HA1P13674 534 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 PTPREP23469 700 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 CYP2C19P33261 490 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 FMR1Q06787 632 aaKnown RBP eCLIP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 HLTFQ14527 1009 aaKnown RBP eCLIP9.29□□□□□ -0.924e-9■■■□□ 15
CRNKL1-202ENST00000377340 C15orf52Q6ZUT6 534 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 MCPH1Q8NEM0 835 aa9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
CRNKL1-202ENST00000377340 KCNJ18B7U540 433 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 CLDN3O15551 220 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 TBC1D8O95759 1140 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 NPEPPSP55786 919 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 KLHL30Q0D2K2 578 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 KCNJ12Q14500 433 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 SLC9C1Q4G0N8 1177 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 TEX35Q5T0J7 233 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 LRRC71Q8N4P6 559 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 GOLGA5Q8TBA6 731 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 UBXN4Q92575 508 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 DPF3Q92784 378 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 LBHD1Q9BQE6 289 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 MSTO1Q9BUK6 570 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 SYNJ2BP-COX16A0A087WUM0 186 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 SFNP31947 248 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 LMAN1P49257 510 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 LACTBP83111 547 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 SFR1Q86XK3 245 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 FAM186BQ8IYM0 893 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP1R9BQ96SB3 815 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 COX16Q9P0S2 106 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 MYO1AQ9UBC5 1043 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 GAKO14976 1311 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 PFASO15067 1338 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 AKR1B15C9JRZ8 316 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 PEX10O60683 326 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 XRCC6P12956 609 aaKnown RBP eCLIP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 DPCR1Q3MIW9 517 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 TAX1BP1Q86VP1 789 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 GSDMAQ96QA5 445 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 LSM14BQ9BX40 385 aaKnown RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 CNTNAP5Q8WYK1 1306 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 GAP43P17677 238 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 CD58P19256 250 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 ABCB4P21439 1286 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 MAPK4P31152 587 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 SNW1Q13573 536 aaKnown RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 PTPROQ16827 1216 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 CEP57Q86XR8 500 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 GPT2Q8TD30 523 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 GTF3C2Q8WUA4 911 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 PPP1R13LQ8WUF5 828 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 KIF2CQ99661 725 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 MROH8Q9H579 483 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 FAM184BQ9ULE4 1060 aa9.28□□□□□ -0.92
CRNKL1-202ENST00000377340 VWA5AO00534 786 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 XPOTO43592 962 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 SPOPO43791 374 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 PIK3CAP42336 1068 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CUL4BQ13620 913 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 ASIC2Q16515 512 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 SCARA5Q6ZMJ2 495 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 RNF180Q86T96 592 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 HOOK3Q86VS8 718 aa9.27□□□□□ -0.93
CRNKL1-202ENST00000377340 CNGA4Q8IV77 575 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms