RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 MXRA7P84157 204 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 TUBB8Q3ZCM7 444 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 SEPT12Q8IYM1 358 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 BLIDQ8IZY5 108 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 CCDC51Q96ER9 411 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 SLC5A4Q9NY91 659 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 STX8Q9UNK0 236 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 BZW2Q9Y6E2 419 aaKnown RBP16.98■□□□□ 0.31
FXN-201ENST00000377270 TMEM221A6NGB7 291 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 RASSF10A6NK89 507 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 GOLGA8KD6RF30 607 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 FECHP22830 423 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 BTDP43251 543 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 ADCY1Q08828 1119 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 CNGA4Q8IV77 575 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 RNF168Q8IYW5 571 aaPredicted RBP16.98■□□□□ 0.31
FXN-201ENST00000377270 STAMQ92783 540 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
FXN-201ENST00000377270 MAD2L2Q9UI95 211 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
FXN-201ENST00000377270 ATP2B4P23634 1241 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 SESN3P58005 492 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 ELF3P78545 371 aaPredicted RBP16.97■□□□□ 0.31
FXN-201ENST00000377270 SKOR1P84550 965 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 XRCC4Q13426 336 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 CUL4BQ13620 913 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 GRM4Q14833 912 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 C6orf89Q6UWU4 347 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
FXN-201ENST00000377270 TMTC1Q8IUR5 882 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 SPIRE2Q8WWL2 714 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 SBF2Q86WG5 1849 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 SPDYE5A6NIY4 337 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 DIAPH2O60879 1101 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 FUT4P22083 530 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 ERCC5P28715 1186 aaPredicted RBP16.97■□□□□ 0.31
FXN-201ENST00000377270 ALDH3A1P30838 453 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 PBX1P40424 430 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 NT5C2P49902 561 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 HDLBPQ00341 1268 aaKnown RBP16.97■□□□□ 0.31
FXN-201ENST00000377270 DYNC1I2Q13409 638 aaKnown RBP16.97■□□□□ 0.31
FXN-201ENST00000377270 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 KLHL10Q6JEL2 608 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 WDR37Q9Y2I8 494 aa16.97■□□□□ 0.31
FXN-201ENST00000377270 RASA1P20936 1047 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 CASP14P31944 242 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 DPYDQ12882 1025 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 IL17AQ16552 155 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 PABPC1LQ4VXU2 614 aaKnown RBP16.96■□□□□ 0.31
FXN-201ENST00000377270 SMYD1Q8NB12 490 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 RASGRP4Q8TDF6 673 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 RPGRIP1Q96KN7 1286 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 MMS19Q96T76 1030 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 SH3GLB2Q9NR46 395 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 PCDHA4Q9UN74 947 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 AFF2P51816 1311 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 SYNRGQ9UMZ2 1314 aa16.96■□□□□ 0.31
FXN-201ENST00000377270 BTG3Q14201 252 aaPredicted RBP16.96■□□□□ 0.3
FXN-201ENST00000377270 ANKRD20A8PQ5CZ79 823 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 CRELD2Q6UXH1 353 aaPredicted RBP16.96■□□□□ 0.3
FXN-201ENST00000377270 APTXQ7Z2E3 356 aaKnown RBP16.96■□□□□ 0.3
FXN-201ENST00000377270 ATP11CQ8NB49 1132 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 MAIP1Q8WWC4 291 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 RMDN2Q96LZ7 410 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 GSDMAQ96QA5 445 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 EPN3Q9H201 632 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 GGA2Q9UJY4 613 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 FRMD4BQ9Y2L6 1034 aa16.96■□□□□ 0.3
FXN-201ENST00000377270 LRRD1A4D1F6 860 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 ZMYND10O75800 440 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 IL1R1P14778 569 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
FXN-201ENST00000377270 STX17P56962 302 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 TMED1Q13445 227 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 CCDC92Q53HC0 331 aaPredicted RBP16.95■□□□□ 0.3
FXN-201ENST00000377270 TYW1BQ6NUM6 668 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 GSPT2Q8IYD1 628 aaKnown RBP16.95■□□□□ 0.3
FXN-201ENST00000377270 NEK9Q8TD19 979 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.95■□□□□ 0.39e-6■■■■■ 27.7
FXN-201ENST00000377270 BRD8Q9H0E9 1235 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 NOP53Q9NZM5 478 aaKnown RBP16.95■□□□□ 0.3
FXN-201ENST00000377270 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 SLC35G1Q2M3R5 365 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 SMYD4Q8IYR2 804 aaPredicted RBP16.95■□□□□ 0.3
FXN-201ENST00000377270 OSBPL7Q9BZF2 842 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 ZNF287Q9HBT7 754 aa16.95■□□□□ 0.3
FXN-201ENST00000377270 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 CYTH3O43739 400 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
FXN-201ENST00000377270 BBOX1O75936 387 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 LUC7L3O95232 432 aaKnown RBP16.94■□□□□ 0.3
FXN-201ENST00000377270 CNGA1P29973 690 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms