RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 LRRC55Q6ZSA7 311 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 RETREG2Q8NC44 543 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 PRMT6Q96LA8 375 aaPredicted RBP18.9■□□□□ 0.62
TRIM27-201ENST00000377194 NDST4Q9H3R1 872 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 GRIN2DO15399 1336 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 SHTN1A0MZ66 631 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
TRIM27-201ENST00000377194 FKBP1AP62942 108 aaKnown RBP18.9■□□□□ 0.62
TRIM27-201ENST00000377194 COASYQ13057 564 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 VWA3BQ502W6 1294 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 CCDC122Q5T0U0 273 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 HAUS4Q9H6D7 363 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 NHEJ1Q9H9Q4 299 aaPredicted RBP18.9■□□□□ 0.62
TRIM27-201ENST00000377194 CD248Q9HCU0 757 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 TBC1D7Q9P0N9 293 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 SERPINA10Q9UK55 444 aa18.9■□□□□ 0.62
TRIM27-201ENST00000377194 NPHP3-ACAD11A0A0J9YXS1 232 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 POTEB3A0JP26 581 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 POTECB2RU33 542 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 ZNF185O15231 689 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.62
TRIM27-201ENST00000377194 POTEBQ6S5H4 581 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 CRYGNQ8WXF5 182 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 LACRTQ9GZZ8 138 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 SIK3Q9Y2K2 1263 aa18.89■□□□□ 0.62
TRIM27-201ENST00000377194 TARSL2A2RTX5 802 aaKnown RBP18.89■□□□□ 0.61
TRIM27-201ENST00000377194 EIF3HO15372 352 aaKnown RBP eCLIP18.89■□□□□ 0.614e-7■■□□□ 11.5
TRIM27-201ENST00000377194 NDUFB10O96000 172 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 PLEKP08567 350 aaPredicted RBP18.89■□□□□ 0.61
TRIM27-201ENST00000377194 USP11P51784 963 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 USH1GQ495M9 461 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 HYIQ5T013 277 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 CCNI2Q6ZMN8 369 aaPredicted RBP18.89■□□□□ 0.61
TRIM27-201ENST00000377194 TMEM179Q6ZVK1 233 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
TRIM27-201ENST00000377194 CYP27A1Q02318 531 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 PPFIA1Q13136 1202 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 PAPD7Q5XG87 772 aaKnown RBP18.88■□□□□ 0.61
TRIM27-201ENST00000377194 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 CCDC155Q8N6L0 562 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 CAGE1Q8TC20 777 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 JAKMIP2Q96AA8 810 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 FAM207AQ9NSI2 230 aaPredicted RBP18.88■□□□□ 0.61
TRIM27-201ENST00000377194 DUSP10Q9Y6W6 482 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 A0A1W2PRG0 241 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 GH2P01242 217 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 USP8P40818 1118 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 LRRC63Q05C16 580 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 FIGNQ5HY92 759 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 CNPY4Q8N129 248 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 PANK4Q9NVE7 773 aa18.88■□□□□ 0.61
TRIM27-201ENST00000377194 CYP3A7-CYP3A51PA0A087WV96 503 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 YDJCA8MPS7 323 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 PDE2AO00408 941 aaPredicted RBP18.87■□□□□ 0.61
TRIM27-201ENST00000377194 MED24O75448 989 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 SCP2P22307 547 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 CYP3A7P24462 503 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 C2orf54Q08AI8 447 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 PSMD2Q13200 908 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 SND1Q7KZF4 910 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRIM27-201ENST00000377194 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 ZNF646O15015 1829 aaPredicted RBP18.87■□□□□ 0.61
TRIM27-201ENST00000377194 SMCHD1A6NHR9 2005 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 ZNF263O14978 683 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
TRIM27-201ENST00000377194 PLA2G4BP0C869 781 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 ARHGAP4P98171 946 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 PDCLQ13371 301 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 ZCWPW2Q504Y3 356 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 GBP6Q6ZN66 633 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 MBOAT7Q96N66 472 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 AMNQ9BXJ7 453 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 LRRC27Q9C0I9 530 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 A0A1W2PQJ5 194 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 SPIRE1Q08AE8 756 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 MAN2A1Q16706 1144 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 PRR16Q569H4 304 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 FAM26FQ5R3K3 315 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 KRT26Q7Z3Y9 468 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 MYOCDQ8IZQ8 938 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 NT5C3AQ9H0P0 336 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 ZNHIT6Q9NWK9 470 aaKnown RBP18.87■□□□□ 0.61
TRIM27-201ENST00000377194 PCDHA2Q9Y5H9 948 aa18.87■□□□□ 0.61
TRIM27-201ENST00000377194 FAM86B1E9PN63 330 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 OPLAHO14841 1288 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 FAM86B2P0C5J1 330 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 CKAP4Q07065 602 aaKnown RBP18.86■□□□□ 0.61
TRIM27-201ENST00000377194 EZH2Q15910 746 aaKnown RBP18.86■□□□□ 0.61
TRIM27-201ENST00000377194 PRPF38AQ8NAV1 312 aaKnown RBP18.86■□□□□ 0.61
TRIM27-201ENST00000377194 GMCL1P1Q8NEA9 526 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 ETNPPLQ8TBG4 499 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 LENG9Q96B70 501 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 GLT8D2Q9H1C3 349 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 MMRN2Q9H8L6 949 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 POTEFA5A3E0 1075 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 NDUFAB1O14561 156 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 POTEIP0CG38 1075 aa18.86■□□□□ 0.61
TRIM27-201ENST00000377194 ATP1A2P50993 1020 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms