RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 EHD4Q9H223 541 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 A0A087X0T9 212 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
USP11-204ENST00000377107 FAM228BP0C875 321 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 ABCB4P21439 1286 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 USP8P40818 1118 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 SF3A3Q12874 501 aaKnown RBP eCLIP14.23□□□□□ -0.133e-6■■■■■ 41.4
USP11-204ENST00000377107 GPATCH4Q5T3I0 446 aaKnown RBP14.23□□□□□ -0.13
USP11-204ENST00000377107 SH2D3AQ9BRG2 576 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 NT5C3AQ9H0P0 336 aa14.23□□□□□ -0.13
USP11-204ENST00000377107 TDRD3Q9H7E2 651 aaKnown RBP14.23□□□□□ -0.13
USP11-204ENST00000377107 ARMCX3Q9UH62 379 aaPredicted RBP14.23□□□□□ -0.13
USP11-204ENST00000377107 TUBBP07437 444 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 CRKP46108 304 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 LRRC55Q6ZSA7 311 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 CREG2Q8IUH2 290 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 AP1M1Q9BXS5 423 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 CLRN2A0PK11 232 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 ARHGAP4P98171 946 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 PDIA5Q14554 519 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 CFAP221Q4G0U5 840 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 SH2D3CQ8N5H7 860 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 HDAC9Q9UKV0 1011 aa14.22□□□□□ -0.13
USP11-204ENST00000377107 ZBTB39O15060 712 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 HSF2BPO75031 334 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 HEXIM1O94992 359 aaKnown RBP14.21□□□□□ -0.13
USP11-204ENST00000377107 MYBP10242 640 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 TCP1P17987 556 aaKnown RBP14.21□□□□□ -0.13
USP11-204ENST00000377107 CYP2J2P51589 502 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 KCNA1Q09470 495 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 LLGL1Q15334 1064 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 CERS3Q8IU89 383 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 MYCT1Q8N699 235 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 ERMNQ8TAM6 284 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 PLCH1Q4KWH8 1693 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 TCP10L2B9ZVM9 353 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 F5H6K3 240 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 GH2P01242 217 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 KLRC3Q07444 240 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 FBXO11Q86XK2 927 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 DNAJC19Q96DA6 116 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 COA1Q9GZY4 146 aa14.21□□□□□ -0.13
USP11-204ENST00000377107 ANO9A1A5B4 782 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 CYP11B2P19099 503 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.14
USP11-204ENST00000377107 ARHGAP44Q17R89 818 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 WDR93Q6P2C0 686 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 CATSPER3Q86XQ3 398 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 SCFD1Q8WVM8 642 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 RPGRIP1Q96KN7 1286 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 GJD4Q96KN9 370 aaPredicted RBP14.21□□□□□ -0.14
USP11-204ENST00000377107 MED4Q9NPJ6 270 aa14.21□□□□□ -0.14
USP11-204ENST00000377107 EDIL3O43854 480 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 TRADDQ15628 312 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 FNBP4Q8N3X1 1017 aaPredicted RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 U2AF1L4Q8WU68 220 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 UBXN6Q9BZV1 441 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 RRP15Q9Y3B9 282 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 IRS2Q9Y4H2 1338 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 ESYT2A0FGR8 921 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 FAM13AO94988 1023 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 CARSP49589 748 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 CASP4P49662 377 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 BAP1Q92560 729 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 REEP2Q9BRK0 252 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 SAMM50Q9Y512 469 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 ROBO3Q96MS0 1386 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 MYO1CO00159 1063 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 GFPT2O94808 682 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 SYF2O95926 243 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 KRT14P02533 472 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 CCT5P48643 541 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 EXOC3L4Q17RC7 722 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 HAUS3Q68CZ6 603 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 SYCP3Q8IZU3 236 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 TLR10Q9BXR5 811 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 DHX36Q9H2U1 1008 aaKnown RBP14.2□□□□□ -0.14
USP11-204ENST00000377107 VEZTQ9HBM0 779 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 STIM2Q9P246 746 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 FAM184BQ9ULE4 1060 aa14.2□□□□□ -0.14
USP11-204ENST00000377107 SERPING1P05155 500 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 MMP10P09238 476 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 ABCB5Q2M3G0 1257 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 ZC2HC1CQ53FD0 456 aaPredicted RBP14.19□□□□□ -0.14
USP11-204ENST00000377107 CFAP58Q5T655 872 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 A0A1W2PQJ5 194 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 TMEM110-MUSTN1A8MSY1 372 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 TLR2O60603 784 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 GNGT1P63211 74 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 PSMD2Q13200 908 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 AMNQ9BXJ7 453 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 CEP72Q9P209 647 aa14.19□□□□□ -0.14
USP11-204ENST00000377107 ATP6V0A2Q9Y487 856 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms