RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 DPH5Q9H2P9 285 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 CDC42EP1Q00587 391 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 GEN1Q17RS7 908 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
MDC1-201ENST00000376406 EPSTI1Q96J88 318 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 CYP2E1P05181 493 aaPredicted RBP11.92□□□□□ -0.5
MDC1-201ENST00000376406 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 SLFN12LQ6IEE8 588 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 FAM186BQ8IYM0 893 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 NCAPGQ9BPX3 1015 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 KLHL14Q9P2G3 628 aa11.92□□□□□ -0.5
MDC1-201ENST00000376406 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 DMTNQ08495 405 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 TMTC3Q6ZXV5 915 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 CYB5R4Q7L1T6 521 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 ACRBPQ8NEB7 543 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 PGBD1Q96JS3 809 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 LY9Q9HBG7 655 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 MED7O43513 233 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 SEC31AO94979 1220 aaKnown RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 PTK2Q05397 1052 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 C2orf54Q08AI8 447 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 SEPT14Q6ZU15 432 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 CDK8P49336 464 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 ATP1A2P50993 1020 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 PNMA8AQ86V59 439 aaPredicted RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 CACYBPQ9HB71 228 aaKnown RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 GCNT4Q9P109 453 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 MFAP3LO75121 409 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 MB21D2Q8IYB1 491 aaPredicted RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 RNF169Q8NCN4 708 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 MMS19Q96T76 1030 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 TPD52P55327 224 aaPredicted RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 KRT31Q15323 416 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 STRIP1Q5VSL9 837 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 ZNF449Q6P9G9 518 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 HLFQ16534 295 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
MDC1-201ENST00000376406 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 NT5C1BQ96P26 610 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
MDC1-201ENST00000376406 USP17L10C9JJH3 530 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 MOCS3O95396 460 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 KYAT1Q16773 422 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 RNF207Q6ZRF8 634 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 CFAP57Q96MR6 1250 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 DDX23Q9BUQ8 820 aaKnown RBP11.9□□□□□ -0.5
MDC1-201ENST00000376406 PLA2G4BP0C869 781 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 STXBP2Q15833 593 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 RNF10Q8N5U6 811 aaKnown RBP11.9□□□□□ -0.5
MDC1-201ENST00000376406 CCDC151A5D8V7 595 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 PGRMC1O00264 195 aaKnown RBP11.9□□□□□ -0.5
MDC1-201ENST00000376406 SH3BP5O60239 455 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 ZBTB7AO95365 584 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 CIITAP33076 1130 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 TTLL4Q14679 1199 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 LRRC41Q15345 812 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 DHX40Q8IX18 779 aaKnown RBP11.9□□□□□ -0.5
MDC1-201ENST00000376406 FMR1NBQ8N0W7 255 aaPredicted RBP11.9□□□□□ -0.5
MDC1-201ENST00000376406 ZNF526Q8TF50 670 aaPredicted RBP11.9□□□□□ -0.5
MDC1-201ENST00000376406 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 ALX1Q15699 326 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 RINT1Q6NUQ1 792 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 VCX3BQ9H321 246 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 CPDO75976 1380 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 FOXO4P98177 505 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 PLCB4Q15147 1175 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 SNX25Q9H3E2 840 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
MDC1-201ENST00000376406 ABCB11O95342 1321 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 PTPROQ16827 1216 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 FAM133AQ8N9E0 248 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 NEK9Q8TD19 979 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 CAPN7Q9Y6W3 813 aa11.9□□□□□ -0.51
MDC1-201ENST00000376406 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 EN1Q05925 392 aaPredicted RBP11.89□□□□□ -0.51
MDC1-201ENST00000376406 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 TTC1Q99614 292 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
MDC1-201ENST00000376406 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 PDXDC2PQ6P474 469 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 PHLDB2Q86SQ0 1253 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 ANKFY1Q9P2R3 1169 aa11.89□□□□□ -0.51
MDC1-201ENST00000376406 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms