RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 CCDC40Q4G0X9 1142 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 PREPLQ4J6C6 727 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 MMGT1Q8N4V1 131 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 TSEN2Q8NCE0 465 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 ODF2LQ9ULJ1 636 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 ANO9A1A5B4 782 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 RAD21O60216 631 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 IPO7O95373 1038 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 MATR3P43243 847 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 EPHB4P54760 987 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 FKBP1BP68106 108 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 MRPS25P82663 173 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 NNTQ13423 1086 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 NAA35Q5VZE5 725 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 YTHDF3Q7Z739 585 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 MIEF2Q96C03 454 aa16.6■□□□□ 0.25
CCHCR1-201ENST00000376266 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 MACROD2A1Z1Q3 448 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 CDR1P51861 262 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 SMTNP53814 917 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 CATIPQ7Z7H3 387 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 MKL1Q969V6 931 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 LACRTQ9GZZ8 138 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 EPN3Q9H201 632 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 RWDD2AQ9UIY3 292 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 CCDC189A1A4V9 331 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 IFNAR1P17181 557 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 LSP1P33241 339 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 TROAPQ12815 778 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 SPP2Q13103 211 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 PAK1Q13153 545 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 CEP85LQ5SZL2 805 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 ARHGEF10LQ9HCE6 1279 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 POLD4Q9HCU8 107 aa16.59■□□□□ 0.25
CCHCR1-201ENST00000376266 TRIM75PA6NK02 468 aa16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 CYLC1P35663 651 aaPredicted RBP16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 ACTN3Q08043 901 aaPredicted RBP16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 EMBQ6PCB8 327 aa16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 WDR59Q6PJI9 974 aa16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 OXER1Q8TDS5 423 aa16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 DNAJC7Q99615 494 aa16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.25
CCHCR1-201ENST00000376266 MYH4Q9Y623 1939 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 RCCD1A6NED2 376 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 GUCY1A3Q02108 690 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 DGKZQ13574 1117 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 FKBP15Q5T1M5 1219 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 ZNF662Q6ZS27 426 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 ZNF473Q8WTR7 871 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 NELFBQ8WX92 580 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 RUBCNQ92622 972 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 SLC10A4Q96EP9 437 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 RNPC3Q96LT9 517 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 TMX2Q9Y320 296 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 TRPM7Q96QT4 1865 aa16.58■□□□□ 0.24
CCHCR1-201ENST00000376266 HUNKP57058 714 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 FSTL1Q12841 308 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 IFT88Q13099 833 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 CREG2Q8IUH2 290 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 CCDC13Q8IYE1 715 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 SPICE1Q8N0Z3 855 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 ZIM3Q96PE6 472 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 F5H6K3 240 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 KRT14P02533 472 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 KLRC3Q07444 240 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 MTMR2Q13614 643 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 KIAA1755Q5JYT7 1200 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 ERO1BQ86YB8 467 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 MB21D1Q8N884 522 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 AFG3L2Q9Y4W6 797 aa16.57■□□□□ 0.24
CCHCR1-201ENST00000376266 PPP2R5AQ15172 486 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 KDM7AQ6ZMT4 941 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 CEP57Q86XR8 500 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 SPATA4Q8NEY3 305 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 WDR18Q9BV38 432 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 SLC40A1Q9NP59 571 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 ZNHIT6Q9NWK9 470 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 SNX12Q9UMY4 172 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 SPDYE5A6NIY4 337 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 USP17L10C9JJH3 530 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 IRF6O14896 467 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 RASSF9O75901 435 aa16.56■□□□□ 0.24
CCHCR1-201ENST00000376266 KIF5AQ12840 1032 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms