RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 ACTN1P12814 892 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 CYP11B2P19099 503 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 EPHB4P54760 987 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 RAPGEF1Q13905 1077 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 VPS72Q15906 364 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 GPBP1Q86WP2 473 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 SYN2Q92777 582 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 P2RX7Q99572 595 aaKnown RBP13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 LRRC27Q9C0I9 530 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZBTB5O15062 677 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 MED24O75448 989 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 CACNB3P54284 484 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 PSMC6P62333 389 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 SLC18A3Q16572 532 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 CFAP221Q4G0U5 840 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 DPY19L2P1Q6NXN4 242 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 EMBQ6PCB8 327 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 GOLPH3Q9H4A6 298 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 EMILIN3Q9NT22 766 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 NFU1Q9UMS0 254 aa13.66□□□□□ -0.22
TNFSF13B-201ENST00000375887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 KRT14P02533 472 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 MRPL12P52815 198 aaKnown RBP13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 ADAM9Q13443 819 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTEGQ6S5H5 508 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 SLC30A10Q6XR72 485 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 SLF2Q8IX21 1173 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 TBC1D22AQ8WUA7 517 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 GANQ9H2C0 597 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 EFCC1Q9HA90 598 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 EPB41L5Q9HCM4 733 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 PCDHAC2Q9Y5I4 1007 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 HOXD13P35453 343 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 MARSP56192 900 aaKnown RBP13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 CORO7P57737 925 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 GUCY2DQ02846 1103 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 SEPT2Q15019 361 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZFPM1Q8IX07 1006 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 SH2D3CQ8N5H7 860 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 IFT81Q8WYA0 676 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 RUBCNQ92622 972 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 CAVIN3Q969G5 261 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 ZIM3Q96PE6 472 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 GDF3Q9NR23 364 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 AIPL1Q9NZN9 384 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
TNFSF13B-201ENST00000375887 GRID2IPA4D2P6 1211 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 HEXIM1O94992 359 aaKnown RBP13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 SERPINB2P05120 415 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 SLC9A1P19634 815 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 KLHL30Q0D2K2 578 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 MEI1Q5TIA1 1274 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 CCDC65Q8IXS2 484 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 KRT12Q99456 494 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 GYS1P13807 737 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 TNFRSF8P28908 595 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 SLC12A3P55017 1021 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 PTK2Q05397 1052 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 NFIAQ12857 509 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 PPFIA1Q13136 1202 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 KCTD16Q68DU8 428 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 ARHGAP27Q6ZUM4 889 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 IQCKQ8N0W5 287 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 CAPS2Q9BXY5 557 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
TNFSF13B-201ENST00000375887 ZNF233A6NK53 670 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 MEIS1O00470 390 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 CCT5P48643 541 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 QRICH1Q2TAL8 776 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 ZNF571Q7Z3V5 609 aaPredicted RBP13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 IRF2BP2Q7Z5L9 587 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 ZC3H3Q8IXZ2 948 aaKnown RBP13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 CASKIN2Q8WXE0 1202 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 NUCKS1Q9H1E3 243 aaKnown RBP13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 BBOX1O75936 387 aa13.63□□□□□ -0.23
TNFSF13B-201ENST00000375887 EPB41P11171 864 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms