RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 IL25Q9H293 177 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 MKRN1Q9UHC7 482 aaKnown RBP14.81□□□□□ -0.04
C9orf47-203ENST00000375851 PASKQ96RG2 1323 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 PVALEFA0A1B0GWK0 134 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 PRR29P0C7W0 189 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 SRBD1Q8N5C6 995 aaKnown RBP14.81□□□□□ -0.04
C9orf47-203ENST00000375851 PP2D1A8MPX8 630 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 HEXIM1O94992 359 aaKnown RBP14.81□□□□□ -0.04
C9orf47-203ENST00000375851 MAPK4P31152 587 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 CAPN12Q6ZSI9 719 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 IGDCC4Q8TDY8 1250 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 TBC1D31Q96DN5 1066 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 FAM20AQ96MK3 541 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
C9orf47-203ENST00000375851 THAP12O43422 761 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 PEX3P56589 373 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 LLGL1Q15334 1064 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ALKBH5Q6P6C2 394 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 SMC1BQ8NDV3 1235 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 UBE2Q2Q8WVN8 375 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 PCDHA13Q9Y5I0 950 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 LGALS16A8MUM7 142 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 GOLGA8KD6RF30 607 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 PGRMC1O00264 195 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ATF2P15336 505 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 RC3H1Q5TC82 1133 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 PPP1R18Q6NYC8 613 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 TAB3Q8N5C8 712 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 EPB41L5Q9HCM4 733 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 TYW1Q9NV66 732 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ODF2LQ9ULJ1 636 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 PXDNLA1KZ92 1463 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 GOLGA8IPA6NC78 632 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 K7ERI5 159 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 SEC31AO94979 1220 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ARHGAP25P42331 645 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ALCAMQ13740 583 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ZSCAN26Q16670 478 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 TRIM11Q96F44 468 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ANKRD36BP1Q96IX9 119 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ZNF512BQ96KM6 892 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 FAM81BQ96LP2 452 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 BPIFA3Q9BQP9 254 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 AGLP35573 1532 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 SARNPP82979 210 aaKnown RBP14.8□□□□□ -0.04
C9orf47-203ENST00000375851 SFR1Q86XK3 245 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 ADGRF4Q8IZF3 695 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 DAAM1Q9Y4D1 1078 aa14.8□□□□□ -0.04
C9orf47-203ENST00000375851 PALM3A6NDB9 673 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-203ENST00000375851 FOXN1O15353 648 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 IREB2P48200 963 aaKnown RBP14.79□□□□□ -0.04
C9orf47-203ENST00000375851 ARMC9Q7Z3E5 817 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 TBC1D16Q8TBP0 767 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 HAUS1Q96CS2 278 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 POLD4Q9HCU8 107 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 RNF14Q9UBS8 474 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 NXF1Q9UBU9 619 aaKnown RBP14.79□□□□□ -0.04
C9orf47-203ENST00000375851 PIK3C2BO00750 1634 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 POTEB3A0JP26 581 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 POTECB2RU33 542 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 ATP2C1P98194 919 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-203ENST00000375851 POTEBQ6S5H4 581 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 FAM71BQ8TC56 605 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 STMN2Q93045 179 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 TAF6LQ9Y6J9 622 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 I3L4J1 428 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 RNF40O75150 1001 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 TDP2O95551 362 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 ABCD1P33897 745 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 MTMR1Q13613 665 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-203ENST00000375851 PTPN22Q9Y2R2 807 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 NUB1Q9Y5A7 615 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
C9orf47-203ENST00000375851 CCDC151A5D8V7 595 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 XPOTO43592 962 aaKnown RBP14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ZNF131P52739 623 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ORC2Q13416 577 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-203ENST00000375851 C10orf76Q5T2E6 689 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 PRR5LQ6MZQ0 368 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 MAP7D3Q8IWC1 876 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 EXOC8Q8IYI6 725 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 PPFIBP2Q8ND30 876 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 RAD54LQ92698 747 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 RAVER2Q9HCJ3 691 aaKnown RBP14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ZNF277Q9NRM2 450 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 PHBP35232 272 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 BBOF1Q8ND07 529 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ATP2A3Q93084 1043 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 BEGAINQ9BUH8 593 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 SPATA31A1Q5TZJ5 1347 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 GOLGA8SH3BPF8 625 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 GBP1P32455 592 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ITPK1Q13572 414 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 VPS72Q15906 364 aa14.78□□□□□ -0.04
C9orf47-203ENST00000375851 ANKRD20A3Q5VUR7 823 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms