RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 CELF3Q5SZQ8 465 aaKnown RBP10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 ARHGEF16Q5VV41 709 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 NECTIN4Q96NY8 510 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 TAAR1Q96RJ0 339 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 RTP3Q9BQQ7 232 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 C16orf70Q9BSU1 422 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 USP26Q9BXU7 913 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 NAPBQ9H115 298 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 S1PR5Q9H228 398 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 MRPL42Q9Y6G3 142 aaKnown RBP10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 OTOGLQ3ZCN5 2332 aa10.98□□□□□ -0.65
HLA-DOA-202ENST00000374813 PER2O15055 1255 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 NMT2O60551 498 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 NR3C2P08235 984 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 TOP1P11387 765 aaKnown RBP10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 DUSP6Q16828 381 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 KBTBD3Q8NAB2 608 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 SYTL5Q8TDW5 730 aaPredicted RBP10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 HINFPQ9BQA5 517 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
HLA-DOA-202ENST00000374813 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 FRMPD2Q68DX3 1309 aaPredicted RBP10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 RBAK-RBAKDNI3L0D1 243 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 PPFIA3O75145 1194 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 STAG3L1P0CL83 205 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 AOC1P19801 751 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 TECP42680 631 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 USH1GQ495M9 461 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 CES5AQ6NT32 575 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 ANKRD54Q6NXT1 300 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 RASGRP2Q7LDG7 609 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 RSPH3Q86UC2 560 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 CCDC105Q8IYK2 499 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 FLCNQ8NFG4 579 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 RASGRP4Q8TDF6 673 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 RUBCNQ92622 972 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 FTHL17Q9BXU8 183 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 EHMT1Q9H9B1 1298 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 MLXIPQ9HAP2 919 aa10.96□□□□□ -0.65
HLA-DOA-202ENST00000374813 ABCB11O95342 1321 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 GGPS1O95749 300 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 CHRNA1P02708 482 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 GHRP10912 638 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 EIF2AK2P19525 551 aaKnown RBP10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 SP100P23497 879 aaPredicted RBP10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 ITIH3Q06033 890 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 ST3GAL2Q16842 350 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 TAF2Q6P1X5 1199 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 ZC3H14Q6PJT7 736 aaKnown RBP10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 DTWD2Q8NBA8 298 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 TMEM47Q9BQJ4 181 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 SETD4Q9NVD3 440 aa10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 ANKRD11Q6UB99 2663 aaPredicted RBP10.95□□□□□ -0.66
HLA-DOA-202ENST00000374813 NOP56O00567 594 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 LGALS2P05162 132 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 PDHBP11177 359 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 KCNC3Q14003 757 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 GPATCH4Q5T3I0 446 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 SYCE2Q6PIF2 218 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 FAM43BQ6ZT52 329 aaPredicted RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 VN1R2Q8NFZ6 395 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 CYP2W1Q8TAV3 490 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 TBC1D5Q92609 795 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 PXMP2Q9NR77 195 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 TCP11L1Q9NUJ3 509 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 PUF60Q9UHX1 559 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 ZNF215Q9UL58 517 aaPredicted RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 MRPL11Q9Y3B7 192 aaKnown RBP10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 FAM208BQ5VWN6 2430 aa10.94□□□□□ -0.66
HLA-DOA-202ENST00000374813 NRCAMQ92823 1304 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 C2CD4DB7Z1M9 353 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 RPLP2P05387 115 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 MTHFRP42898 656 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 ADAM17P78536 824 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 LPIN1Q14693 890 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 RSPO4Q2I0M5 234 aaPredicted RBP10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 SPOUT1Q5T280 376 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 KIAA0319Q5VV43 1072 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 RUFY4Q6ZNE9 571 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 TSHZ1Q6ZSZ6 1077 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 ZDHHC14Q8IZN3 488 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 BORCS6Q96GS4 357 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 TTC14Q96N46 770 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 ADAM7Q9H2U9 754 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 NGRNQ9NPE2 291 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms