RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 KRT71Q3SY84 523 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 C7orf61Q8IZ16 206 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 RTKN2Q8IZC4 609 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 THAP11Q96EK4 314 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 SIL1Q9H173 461 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 GPR37O15354 613 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 AHCYL1O43865 530 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 ZEB2O60315 1214 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 CCDC192P0DO97 292 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
USP48-203ENST00000374732 GUCY2FP51841 1108 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 NUBP1P53384 320 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 PSMD6Q15008 389 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 TATDN1Q6P1N9 297 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 STRA8Q7Z7C7 330 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 GOLM1Q8NBJ4 401 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 IL17RDQ8NFM7 739 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 TRIM58Q8NG06 486 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 GFM2Q969S9 779 aaKnown RBP8.69□□□□□ -1.02
USP48-203ENST00000374732 DDX11Q96FC9 970 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 ANKEF1Q9NU02 776 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 IL1RAPL1Q9NZN1 696 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 QSER1Q2KHR3 1735 aa8.69□□□□□ -1.02
USP48-203ENST00000374732 TNS1Q9HBL0 1735 aaKnown RBP8.69□□□□□ -1.02
USP48-203ENST00000374732 CTIFO43310 598 aaKnown RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 ERLIN2O94905 339 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 F2P00734 622 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 C6orf222P0C671 652 aaPredicted RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 VARSP26640 1264 aaKnown RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 LMNB2Q03252 620 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 CCDC57Q2TAC2 916 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 NXNQ6DKJ4 435 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 PDLIM2Q96JY6 352 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 GPATCH1Q9BRR8 931 aaKnown RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 MRPL9Q9BYD2 267 aaKnown RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 EDEM3Q9BZQ6 932 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ZCWPW1Q9H0M4 648 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 SERHL2Q9H4I8 314 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 AATFQ9NY61 560 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP48-203ENST00000374732 FAM53CQ9NYF3 392 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ZNF112Q9UJU3 913 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 FAM50BQ9Y247 325 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 PCDHGC5Q9Y5F6 944 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ARHGEF10O15013 1369 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ROBO2Q9HCK4 1378 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 GLI3P10071 1580 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 TMEM247A6NEH6 219 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ZBTB39O15060 712 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 CDK4P11802 303 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 IL13P35225 146 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 RELQ04864 619 aaPredicted RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 AMHR2Q16671 573 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 SETMARQ53H47 684 aaPredicted RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 TADA2BQ86TJ2 420 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 NLRP10Q86W26 655 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ZBTB8BQ8NAP8 495 aaPredicted RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 OR8K1Q8NGG5 319 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 CCHCR1Q8TD31 782 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 PANK1Q8TE04 598 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 UTP15Q8TED0 518 aaKnown RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 BCL7CQ8WUZ0 217 aaPredicted RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 COG3Q96JB2 828 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 UCN2Q96RP3 112 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 CCSER1Q9C0I3 900 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 ITGB1BP2Q9UKP3 347 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 TRPC5Q9UL62 973 aaPredicted RBP8.68□□□□□ -1.02
USP48-203ENST00000374732 FAM184BQ9ULE4 1060 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 PCDHB13Q9Y5F0 798 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 KDRP35968 1356 aa8.68□□□□□ -1.02
USP48-203ENST00000374732 AP3B1O00203 1094 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 CDC45O75419 566 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 FESP07332 822 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 CETN1Q12798 172 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 G3BP1Q13283 466 aaKnown RBP eCLIP8.67□□□□□ -1.02
USP48-203ENST00000374732 SGCGQ13326 291 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 MFSD6Q6ZSS7 791 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 TMC4Q7Z404 712 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 LRRC47Q8N1G4 583 aaKnown RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 SLC22A8Q8TCC7 542 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ALS2CR12Q96Q35 445 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 CRLF2Q9HC73 371 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ATAD3AQ9NVI7 634 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 SLC12A8A0AV02 714 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 TARSL2A2RTX5 802 aaKnown RBP8.67□□□□□ -1.02
USP48-203ENST00000374732 GOLGA8IPA6NC78 632 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 GOLGA8MH3BSY2 632 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ABLIM1O14639 778 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ASAP2O43150 1006 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 COBLO75128 1261 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 ZBED4O75132 1171 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 S100A6P06703 90 aa8.67□□□□□ -1.02
USP48-203ENST00000374732 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms