RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 MAEAQ7L5Y9 396 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 FBXO11Q86XK2 927 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 ZNF713Q8N859 430 aaPredicted RBP18.83■□□□□ 0.61
RXRB-201ENST00000374680 TUBB2BQ9BVA1 445 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 UBXN6Q9BZV1 441 aa18.83■□□□□ 0.61
RXRB-201ENST00000374680 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.61
RXRB-201ENST00000374680 TAF1LQ8IZX4 1826 aa18.83■□□□□ 0.6
RXRB-201ENST00000374680 SMCHD1A6NHR9 2005 aa18.83■□□□□ 0.6
RXRB-201ENST00000374680 MYBP10242 640 aa18.83■□□□□ 0.6
RXRB-201ENST00000374680 RABEP2Q9H5N1 569 aa18.83■□□□□ 0.6
RXRB-201ENST00000374680 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 PDXDC1Q6P996 788 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 MIGA2Q7L4E1 593 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 ACER1Q8TDN7 264 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 CSRNP1Q96S65 589 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 SH2D4AQ9H788 454 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 PCDHB13Q9Y5F0 798 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
RXRB-201ENST00000374680 NOL4O94818 638 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 PPP1R2P41236 205 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 GPS2Q13227 327 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 TPH2Q8IWU9 490 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 EHBP1Q8NDI1 1231 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 MASTLQ96GX5 879 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 REEP2Q9BRK0 252 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 AMNQ9BXJ7 453 aa18.82■□□□□ 0.6
RXRB-201ENST00000374680 DHX36Q9H2U1 1008 aaKnown RBP18.82■□□□□ 0.6
RXRB-201ENST00000374680 ADAMTSL1Q8N6G6 1762 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 EHHADHQ08426 723 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 KCNH2Q12809 1159 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 SFMBT2Q5VUG0 894 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 CDAN1Q8IWY9 1227 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 CCDC17Q96LX7 622 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 NT5C3AQ9H0P0 336 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 MYH7BA7E2Y1 1941 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 EML1O00423 815 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 CASP4P49662 377 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 GJB7Q6PEY0 223 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 CREG2Q8IUH2 290 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.65e-8■■■■■ 211.2
RXRB-201ENST00000374680 SNX12Q9UMY4 172 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 DNM3Q9UQ16 869 aa18.81■□□□□ 0.6
RXRB-201ENST00000374680 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
RXRB-201ENST00000374680 PDE6BP35913 854 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 TBC1D10BQ4KMP7 808 aaPredicted RBP18.8■□□□□ 0.6
RXRB-201ENST00000374680 HNRNPLLQ8WVV9 542 aaKnown RBP18.8■□□□□ 0.6
RXRB-201ENST00000374680 ZDHHC15Q96MV8 337 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 SH2D3AQ9BRG2 576 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 A0A087X0T9 212 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 A0A1W2PQJ5 194 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 ONECUT3O60422 494 aaPredicted RBP18.8■□□□□ 0.6
RXRB-201ENST00000374680 RAD17O75943 681 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 GCNT3O95395 438 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 FAM228BP0C875 321 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 PODNQ7Z5L7 613 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 TRIM58Q8NG06 486 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 OSBPL9Q96SU4 736 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 LRRC27Q9C0I9 530 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 ESYT3A0FGR9 886 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
RXRB-201ENST00000374680 PSMD2Q13200 908 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 ZCWPW2Q504Y3 356 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 KIAA1755Q5JYT7 1200 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 DACT2Q5SW24 774 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 HGSNATQ68CP4 663 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 RDH13Q8NBN7 331 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 ZBTB12Q9Y330 459 aaPredicted RBP18.8■□□□□ 0.6
RXRB-201ENST00000374680 JRKLQ9Y4A0 524 aa18.8■□□□□ 0.6
RXRB-201ENST00000374680 BMP3P12645 472 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 CAPN2P17655 700 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 KLRC1P26715 233 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 KLHL30Q0D2K2 578 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 KIAA0753Q2KHM9 967 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 FIGNQ5HY92 759 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 SYDE2Q5VT97 1194 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 RUSC1Q9BVN2 902 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 KCNMB3Q9NPA1 279 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 PLIN4Q96Q06 1357 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 NHSQ6T4R5 1651 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 ZSCAN5CA6NGD5 496 aaPredicted RBP18.79■□□□□ 0.6
RXRB-201ENST00000374680 CETN3O15182 167 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 MSH4O15457 936 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 SPATA31C1P0DKV0 1188 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 GCFC2P16383 781 aaKnown RBP18.79■□□□□ 0.6
RXRB-201ENST00000374680 SLC12A3P55017 1021 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 GIT2Q14161 759 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 ZC2HC1CQ53FD0 456 aaPredicted RBP18.79■□□□□ 0.6
RXRB-201ENST00000374680 DNAJC21Q5F1R6 531 aaKnown RBP18.79■□□□□ 0.6
RXRB-201ENST00000374680 RBM26Q5T8P6 1007 aaKnown RBP18.79■□□□□ 0.6
RXRB-201ENST00000374680 SND1Q7KZF4 910 aaKnown RBP eCLIP18.79■□□□□ 0.6
RXRB-201ENST00000374680 GBP3Q9H0R5 595 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 VEZTQ9HBM0 779 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 SUGT1Q9Y2Z0 365 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 PCDHA2Q9Y5H9 948 aa18.79■□□□□ 0.6
RXRB-201ENST00000374680 C21orf2O43822 256 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 PALMO75781 387 aa18.78■□□□□ 0.6
RXRB-201ENST00000374680 CKAP4Q07065 602 aaKnown RBP18.78■□□□□ 0.6
RXRB-201ENST00000374680 ORC2Q13416 577 aaPredicted RBP18.78■□□□□ 0.6
RXRB-201ENST00000374680 SPATA4Q8NEY3 305 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms