RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 NECAB2Q7Z6G3 386 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-201ENST00000374673 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.31
HSPG2-201ENST00000374673 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-201ENST00000374673 LAD1O00515 517 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 MARCH6O60337 910 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 LGALS2P05162 132 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 OR52Z1P0C646 297 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 TCF7P36402 384 aaPredicted RBP16.95■□□□□ 0.3
HSPG2-201ENST00000374673 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 CXCL17Q6UXB2 119 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 C4orf32Q8N8J7 132 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 MTG1Q9BT17 334 aaPredicted RBP16.95■□□□□ 0.3
HSPG2-201ENST00000374673 UNC45AQ9H3U1 944 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 VAV3Q9UKW4 847 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 MYH9P35579 1960 aaKnown RBP16.95■□□□□ 0.3
HSPG2-201ENST00000374673 EMSYQ7Z589 1322 aa16.95■□□□□ 0.3
HSPG2-201ENST00000374673 IGKV6D-21A0A0A0MT36 114 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 LGR5O75473 907 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 F2P00734 622 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 SFNP31947 248 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 JAK3P52333 1124 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 SPIRE1Q08AE8 756 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 PTGDRQ13258 359 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 ABHD15Q6UXT9 468 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 RDM1Q8NG50 284 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 KAT2BQ92831 832 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 C16orf70Q9BSU1 422 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 SENP6Q9GZR1 1112 aaPredicted RBP16.94■□□□□ 0.3
HSPG2-201ENST00000374673 STARD7Q9NQZ5 370 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 PCDHA12Q9UN75 941 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
HSPG2-201ENST00000374673 WDR64B1ANS9 1081 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 BMP15O95972 392 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 SUPT20HL2P0C7V6 817 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 ZNF286BP0CG31 522 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 PRPHP41219 470 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 TXKP42681 527 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-201ENST00000374673 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-201ENST00000374673 MIS18BP1Q6P0N0 1132 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 MIER3Q7Z3K6 550 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-201ENST00000374673 FERMT2Q96AC1 680 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 PCYT2Q99447 389 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 KATNAL1Q9BW62 490 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-201ENST00000374673 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 PCDHA10Q9Y5I2 948 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 ALPK3Q96L96 1907 aa16.93■□□□□ 0.3
HSPG2-201ENST00000374673 HAS3O00219 553 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 CHMP2AO43633 222 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 PSAPP07602 524 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 NUCB2P80303 420 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 SNX17Q15036 470 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
HSPG2-201ENST00000374673 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
HSPG2-201ENST00000374673 C1orf53Q5VUE5 145 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 AFAP1L1Q8TED9 768 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 SEZ6LQ9BYH1 1024 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 SMARCAD1Q9H4L7 1026 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-201ENST00000374673 SAMM50Q9Y512 469 aa16.92■□□□□ 0.3
HSPG2-201ENST00000374673 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 H3BRB1 525 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 EML1O00423 815 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 PSEN2P49810 448 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 PSMC6P62333 389 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 PTPAQ15257 358 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 FAM160B1Q5W0V3 765 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 ARL6IP4Q66PJ3 421 aaKnown RBP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 SLC39A5Q6ZMH5 540 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 PLPPR4Q7Z2D5 763 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 TRIM50Q86XT4 487 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 CCDC60Q8IWA6 550 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 ZNF396Q96N95 335 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 USP28Q96RU2 1077 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 AZI2Q9H6S1 392 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 CLIC4Q9Y696 253 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-201ENST00000374673 GRIN2DO15399 1336 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 IGSF9BQ9UPX0 1349 aa16.91■□□□□ 0.3
HSPG2-201ENST00000374673 SLC26A2P50443 739 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 STAT5BP51692 787 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 ITGA7Q13683 1181 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 MFSD10Q14728 455 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 EPHA7Q15375 998 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 KIAA0753Q2KHM9 967 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 TMEM266Q2M3C6 531 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 ATL3Q6DD88 541 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 NCAPH2Q6IBW4 605 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 SWSAP1Q6NVH7 229 aa16.9■□□□□ 0.3
HSPG2-201ENST00000374673 GLG1Q92896 1179 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms