RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 UNC45AQ9H3U1 944 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 TAB2Q9NYJ8 693 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 WRAP73Q9P2S5 460 aaPredicted RBP13.98□□□□□ -0.17
PRPF4-202ENST00000374199 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 RAD21O60216 631 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 ARP10275 920 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 DGKZQ13574 1117 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 FAM26FQ5R3K3 315 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 MYOCDQ8IZQ8 938 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 IL31RAQ8NI17 732 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 TRIM47Q96LD4 638 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
PRPF4-202ENST00000374199 ZMYM2Q9UBW7 1377 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 EIF3DO15371 548 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRPF4-202ENST00000374199 ADKP55263 362 aaKnown RBP13.97□□□□□ -0.17
PRPF4-202ENST00000374199 PGM5Q15124 567 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 PTPN21Q16825 1174 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 GPBP1Q86WP2 473 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 CCDC65Q8IXS2 484 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 WNK4Q96J92 1243 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 SCAF8Q9UPN6 1271 aaKnown RBP13.97□□□□□ -0.17
PRPF4-202ENST00000374199 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 PPP2R2CQ9Y2T4 447 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 N4BP3O15049 544 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 TNNT1P13805 278 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 GUCY2CP25092 1073 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 CASP14P31944 242 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 EPS15P42566 896 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 GOLGA8FQ08AF8 430 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 GOLGA8DPQ0D2H9 430 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 REEP2Q9BRK0 252 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 GGA3Q9NZ52 723 aa13.97□□□□□ -0.17
PRPF4-202ENST00000374199 DBR1Q9UK59 544 aaKnown RBP13.97□□□□□ -0.17
PRPF4-202ENST00000374199 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
PRPF4-202ENST00000374199 GOLGA6L9A6NEM1 432 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 PPP1R37O75864 691 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 ERVK-24P63145 666 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.17
PRPF4-202ENST00000374199 ZYXQ15942 572 aaKnown RBP13.96□□□□□ -0.17
PRPF4-202ENST00000374199 LRCH2Q5VUJ6 765 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 RINT1Q6NUQ1 792 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 WDR59Q6PJI9 974 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 RAD9BQ6WBX8 426 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 DYMQ7RTS9 669 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 NUP58Q9BVL2 599 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
PRPF4-202ENST00000374199 GJA3Q9Y6H8 435 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 IRF6O14896 467 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 NCAPH2Q6IBW4 605 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 TOGARAM2Q6ZUX3 1019 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 BORCS6Q96GS4 357 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 WRNIP1Q96S55 665 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 RUSC1Q9BVN2 902 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 SPON1Q9HCB6 807 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 ADGRG1Q9Y653 693 aa13.96□□□□□ -0.17
PRPF4-202ENST00000374199 FGFR1OPO95684 399 aaKnown RBP13.96□□□□□ -0.18
PRPF4-202ENST00000374199 PTPN14Q15678 1187 aa13.96□□□□□ -0.18
PRPF4-202ENST00000374199 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.18
PRPF4-202ENST00000374199 VWA3BQ502W6 1294 aa13.96□□□□□ -0.18
PRPF4-202ENST00000374199 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.96□□□□□ -0.18
PRPF4-202ENST00000374199 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.18
PRPF4-202ENST00000374199 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.18
PRPF4-202ENST00000374199 FEZ1Q99689 392 aa13.96□□□□□ -0.18
PRPF4-202ENST00000374199 EDEM3Q9BZQ6 932 aa13.96□□□□□ -0.18
PRPF4-202ENST00000374199 KCNH7Q9NS40 1196 aa13.96□□□□□ -0.18
PRPF4-202ENST00000374199 ODF2LQ9ULJ1 636 aa13.96□□□□□ -0.18
PRPF4-202ENST00000374199 NPHP3-ACAD11A0A0J9YXS1 232 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 IPO5O00410 1097 aaKnown RBP13.95□□□□□ -0.18
PRPF4-202ENST00000374199 NRDCO43847 1150 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 GNA14O95837 355 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 GAP43P17677 238 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 SLC30A10Q6XR72 485 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 TRIM59Q8IWR1 403 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 VPS16Q9H269 839 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 SEL1LQ9UBV2 794 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 LCA5LO95447 670 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
PRPF4-202ENST00000374199 SPP2Q13103 211 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 MAPK7Q13164 816 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 TMTC1Q8IUR5 882 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 RDM1Q8NG50 284 aa13.95□□□□□ -0.18
PRPF4-202ENST00000374199 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ZSCAN12O43309 604 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 CASP5P51878 434 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 FKBP3Q00688 224 aaKnown RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 UBXN1Q04323 297 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 SUPT20HL1Q3ZLR7 823 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 RBM46Q8TBY0 533 aaKnown RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 INPP4AQ96PE3 977 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 PDCD2LQ9BRP1 358 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ZNF577Q9BSK1 485 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 TEKT3Q9BXF9 490 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 RAVER2Q9HCJ3 691 aaKnown RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 PFASO15067 1338 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 PDXKO00764 312 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms