RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 BHMT2Q9H2M3 363 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 DNM3Q9UQ16 869 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 FZD9O00144 591 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
PUM1-202ENST00000373741 HIRAP54198 1017 aaPredicted RBP12.82□□□□□ -0.36
PUM1-202ENST00000373741 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 TUBE1Q9UJT0 475 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 ARHGAP6O43182 974 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 NEBLO76041 1014 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■■□□□ 12.2
PUM1-202ENST00000373741 UBXN1Q04323 297 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 RNF207Q6ZRF8 634 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 DDX12PQ92771 950 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
PUM1-202ENST00000373741 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 ESYT2A0FGR8 921 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 BACH1O14867 736 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 USP14P54578 494 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 SCYL3Q8IZE3 742 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 SMCR8Q8TEV9 937 aaPredicted RBP12.81□□□□□ -0.36
PUM1-202ENST00000373741 TRAF5O00463 557 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 CCDC175P0C221 793 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 AK8Q96MA6 479 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 TNS1Q9HBL0 1735 aaKnown RBP12.81□□□□□ -0.36
PUM1-202ENST00000373741 H3BQF6 201 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
PUM1-202ENST00000373741 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
PUM1-202ENST00000373741 DPYDQ12882 1025 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 BAATQ14032 418 aaPredicted RBP12.81□□□□□ -0.36
PUM1-202ENST00000373741 MORC3Q14149 939 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 CAPN7Q9Y6W3 813 aa12.81□□□□□ -0.36
PUM1-202ENST00000373741 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
PUM1-202ENST00000373741 BACE1P56817 501 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 PPP1R18Q6NYC8 613 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 CLMNQ96JQ2 1002 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
PUM1-202ENST00000373741 STK4Q13043 487 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 AP3B2Q13367 1082 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 FKBP1CQ5VVH2 108 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 CTAGE9A4FU28 777 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
PUM1-202ENST00000373741 N4BP1O75113 896 aaKnown RBP12.8□□□□□ -0.36
PUM1-202ENST00000373741 SLFN12Q8IYM2 578 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 FAM76AQ8TAV0 307 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 COL4A5P29400 1685 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 PLA2G4BP0C869 781 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 PTPRAP18433 802 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 ABCB6Q9NP58 842 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 PANK4Q9NVE7 773 aa12.8□□□□□ -0.36
PUM1-202ENST00000373741 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 ZBTB39O15060 712 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
PUM1-202ENST00000373741 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 TAAR1Q96RJ0 339 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 MTRQ99707 1265 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 TRIM9Q9C026 710 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
PUM1-202ENST00000373741 MYH8P13535 1937 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 ZEB2O60315 1214 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 FAM13AO94988 1023 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
PUM1-202ENST00000373741 PDXDC2PQ6P474 469 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 CNNM4Q6P4Q7 775 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 IGSF22Q8N9C0 903 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 FAM71BQ8TC56 605 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 WDR24Q96S15 920 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 MYMKA6NI61 221 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 MSH4O15457 936 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 TEX33O43247 280 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 ARP10275 920 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 TRIM21P19474 475 aaKnown RBP12.79□□□□□ -0.36
PUM1-202ENST00000373741 EPHX2P34913 555 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
PUM1-202ENST00000373741 VGLL4Q14135 290 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 MYCT1Q8N699 235 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 RDH13Q8NBN7 331 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 HAS1Q92839 578 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 SUGCTQ9HAC7 445 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■■■ 48.2
PUM1-202ENST00000373741 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
PUM1-202ENST00000373741 SMCHD1A6NHR9 2005 aa12.78□□□□□ -0.36
PUM1-202ENST00000373741 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
PUM1-202ENST00000373741 RNF40O75150 1001 aa12.78□□□□□ -0.36
PUM1-202ENST00000373741 GCNT3O95395 438 aa12.78□□□□□ -0.36
PUM1-202ENST00000373741 CEP55Q53EZ4 464 aa12.78□□□□□ -0.36
PUM1-202ENST00000373741 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
PUM1-202ENST00000373741 ZNF658Q5TYW1 1059 aaPredicted RBP12.78□□□□□ -0.36
PUM1-202ENST00000373741 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
PUM1-202ENST00000373741 CCDC65Q8IXS2 484 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms