RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 PLA2G4BP0C869 781 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 MMEL1Q495T6 779 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 METTL13Q8N6R0 699 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 COA7Q96BR5 231 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 WDR11Q9BZH6 1224 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 CLIC2O15247 247 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 USP17L8P0C7I0 530 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 PLTPP55058 493 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
LMX1B-202ENST00000373474 DHX9Q08211 1270 aaKnown RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 PPP1R2P3Q6NXS1 205 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 RSBN1LQ6PCB5 846 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 NOP53Q9NZM5 478 aaKnown RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 CYP2D7A0A087X1C5 515 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 SORBS3O60504 671 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 TMEM191BP0C7N4 346 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 IGKV5-2P06315 115 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 CUL1Q13616 776 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 NME8Q8N427 588 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 TTLL11Q8NHH1 800 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 CCDC138Q96M89 665 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 NRBP2Q9NSY0 501 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 PALM3A6NDB9 673 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 POC1B-GALNT4F8VUJ3 575 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 SGK1O00141 431 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 RIOK1Q9BRS2 568 aaKnown RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 SLC16A2P36021 539 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 IFNAR2P48551 515 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 SLC7A5Q01650 507 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 GABPAQ06546 454 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 ASPHQ12797 758 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 RFX6Q8HWS3 928 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 MB21D2Q8IYB1 491 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-202ENST00000373474 SCYL3Q8IZE3 742 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 DYNLL2Q96FJ2 89 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 ANAPC5Q9UJX4 755 aa15.36■□□□□ 0.05
LMX1B-202ENST00000373474 TMEM94Q12767 1356 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 GLE1Q53GS7 698 aaKnown RBP15.35■□□□□ 0.05
LMX1B-202ENST00000373474 FAM160B1Q5W0V3 765 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 PDZD4Q76G19 769 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-202ENST00000373474 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 MMS19Q96T76 1030 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 KIF2CQ99661 725 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 MED10Q9BTT4 135 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 HSPA8P11142 646 aaKnown RBP15.35■□□□□ 0.05
LMX1B-202ENST00000373474 NR1D1P20393 614 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 TERF2Q15554 542 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 CCDC144BQ3MJ40 725 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 TTBK2Q6IQ55 1244 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 EMBQ6PCB8 327 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 USP17L2Q6R6M4 530 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 CSRNP1Q96S65 589 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 M0QZ92 97 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 MEIS1O00470 390 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 EIF3BP55884 814 aaKnown RBP15.35■□□□□ 0.05
LMX1B-202ENST00000373474 ARHGEF18Q6ZSZ5 1173 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 PNMA6FA0A0J9YX94 578 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 LRRIQ4A6NIV6 560 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 RCAN1P53805 252 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 SNX1Q13596 522 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 GRAMD4Q6IC98 578 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 ANKRD35Q8N283 1001 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 TTLL3Q9Y4R7 772 aa15.35■□□□□ 0.05
LMX1B-202ENST00000373474 LGALS16A8MUM7 142 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 CYP27A1Q02318 531 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 PRKG1Q13976 671 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 UBE2TQ9NPD8 197 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 DIS3Q9Y2L1 958 aaKnown RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 MAN1A2O60476 641 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 DR1Q01658 176 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 KANSL2Q9H9L4 492 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 HNRNPDLO14979 420 aaKnown RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 CDC37Q16543 378 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 UBE2SQ16763 222 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 MUM1L1Q5H9M0 696 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 CC2D1AQ6P1N0 951 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 BSDC1Q9NW68 430 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 SEPT9Q9UHD8 586 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 USP17L3A6NCW0 530 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 USP17L4A6NCW7 530 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 H7C0C1 242 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 LRRN2O75325 713 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 INHBAP08476 426 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 ATP5OP48047 213 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 YWHAGP61981 247 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMX1B-202ENST00000373474 SYDE2Q5VT97 1194 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 USP17L1Q7RTZ2 530 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 LY9Q9HBG7 655 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 KMT5AQ9NQR1 393 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 FGFR1OP2Q9NVK5 253 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 ARAP3Q8WWN8 1544 aa15.34■□□□□ 0.05
LMX1B-202ENST00000373474 ZFXP17010 805 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms