RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 FUT8Q9BYC5 575 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 BCAS3Q9H6U6 928 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 TBC1D7Q9P0N9 293 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 EPN1Q9Y6I3 576 aaPredicted RBP7.1□□□□□ -1.27
CHD6-202ENST00000373222 ITIH6Q6UXX5 1313 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 SCN9AQ15858 1988 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 FAM170AA1A519 330 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 GOLGA6L9A6NEM1 432 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 DNAJC6O75061 913 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 IL1R1P14778 569 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 VSNL1P62760 191 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 CRY2Q49AN0 593 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 CYP26C1Q6V0L0 522 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 SLC30A10Q6XR72 485 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 SRGAP1Q7Z6B7 1085 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 ZSCAN29Q8IWY8 852 aaPredicted RBP7.1□□□□□ -1.27
CHD6-202ENST00000373222 AMOTL1Q8IY63 956 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 REXO1Q8N1G1 1221 aaKnown RBP7.1□□□□□ -1.27
CHD6-202ENST00000373222 DAGLBQ8NCG7 672 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 CCDC148Q8NFR7 591 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 NEK11Q8NG66 645 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 RRP36Q96EU6 259 aaKnown RBP7.1□□□□□ -1.27
CHD6-202ENST00000373222 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 TTYH3Q9C0H2 523 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 CCSER1Q9C0I3 900 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 TCP11L1Q9NUJ3 509 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 EGFL7Q9UHF1 273 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 CDC23Q9UJX2 597 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 TTF2Q9UNY4 1162 aaKnown RBP7.1□□□□□ -1.27
CHD6-202ENST00000373222 COMMD10Q9Y6G5 202 aa7.1□□□□□ -1.27
CHD6-202ENST00000373222 NPHP3-ACAD11A0A0J9YXS1 232 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 CTAGE9A4FU28 777 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 H7C1D1 291 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 PSMA7O14818 248 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 IDEP14735 1019 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 TRIM21P19474 475 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 OAS2P29728 719 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 GSTO1P78417 241 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 AMPD2Q01433 879 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 TCP10Q12799 353 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 CBLBQ13191 982 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 LONRF2Q1L5Z9 754 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 MAP9Q49MG5 647 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 GSPT2Q8IYD1 628 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 RGL4Q8IZJ4 473 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 GPR161Q8N6U8 529 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 GOLGA1Q92805 767 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 P2RX5Q93086 422 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 PSMB7Q99436 277 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 NAA15Q9BXJ9 866 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 FAM207AQ9NSI2 230 aaPredicted RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 RMND1Q9NWS8 449 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 MTMR4Q9NYA4 1195 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 SMARCAL1Q9NZC9 954 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 SEC63Q9UGP8 760 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 LUC7L2Q9Y383 392 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 LTBP1Q14766 1721 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 MACROD2A1Z1Q3 448 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 MPHOSPH10O00566 681 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 TRIM37O94972 964 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 TUBB4AP04350 444 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 PDGFRBP09619 1106 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 GNAQP50148 359 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 GABPB1Q06547 395 aaPredicted RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 TBC1D8BQ0IIM8 1120 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 USP17L6PQ6QN14 398 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 ADGRF4Q8IZF3 695 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 OR8K1Q8NGG5 319 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 RABGGTAQ92696 567 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 MMS19Q96T76 1030 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 P2RX7Q99572 595 aaKnown RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 DNAJC7Q99615 494 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 JMJD4Q9H9V9 463 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 C6orf50Q9HD87 102 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 ABCB6Q9NP58 842 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 EXOC1Q9NV70 894 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 EHD2Q9NZN4 543 aa7.09□□□□□ -1.27
CHD6-202ENST00000373222 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.09□□□□□ -1.27
CHD6-202ENST00000373222 PDE2AO00408 941 aaPredicted RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 TOM1O60784 492 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 PHACTR2O75167 634 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 OATP04181 439 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 LDHCP07864 332 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SRGNP10124 158 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 STAT3P40763 770 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 MTIF2P46199 727 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 ARID5AQ03989 594 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 KCNB1Q14721 858 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 CALCRLQ16602 461 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 CT47A1Q5JQC4 288 aaPredicted RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 CCDC122Q5T0U0 273 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SOGA3Q5TF21 947 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 DNAAF5Q86Y56 855 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 MCF2L2Q86YR7 1114 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 ANKRD13CQ8N6S4 541 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms