RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 EXOC1LA0A1B0GW35 172 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 KCNQ3O43525 872 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 ZBED6P86452 979 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 PIGSQ96S52 555 aa12.44□□□□□ -0.42
VCL-202ENST00000372755 CTNND1O60716 968 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 TAC1P20366 129 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 C2orf54Q08AI8 447 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 KRT80Q6KB66 452 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 FGFR1OP2Q9NVK5 253 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 MAN1B1Q9UKM7 699 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 SCINQ9Y6U3 715 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 MYOM2P54296 1465 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 PFDN1O60925 122 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 MMP1P03956 469 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 CIITAP33076 1130 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ATP6V1E1P36543 226 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 AP1ARQ63HQ0 302 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 OLA1Q9NTK5 396 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 RASGRF2O14827 1237 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 PMLP29590 882 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ARPP19P56211 112 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ADCY1Q08828 1119 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ALS2CLQ60I27 953 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 CENPUQ71F23 418 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 HEXIM2Q96MH2 286 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 MYCBPQ99417 103 aaPredicted RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 ACTR5Q9H9F9 607 aaPredicted RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 RPF1Q9H9Y2 349 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 LCMT1Q9UIC8 334 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 HNRNPCL2B2RXH8 293 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 HNRNPCL1O60812 293 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 MOCS3O95396 460 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 CCNE1P24864 410 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 SLFN12LQ6IEE8 588 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 FAM160B2Q86V87 743 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ZBTB18Q99592 522 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 NHEJ1Q9H9Q4 299 aaPredicted RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 TMEM247A6NEH6 219 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 M0R2C6 588 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 COBLO75128 1261 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ZBED1O96006 694 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 DR1Q01658 176 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 SCOCQ9UIL1 159 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 ATP10AO60312 1499 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 PAMP19021 973 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 ADORA1P30542 326 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 IFNA8P32881 189 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 NSUN7Q8NE18 718 aaKnown RBP12.43□□□□□ -0.42
VCL-202ENST00000372755 RASGRP4Q8TDF6 673 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
VCL-202ENST00000372755 RNF123Q5XPI4 1314 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 PRPF3O43395 683 aaKnown RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 BBOX1O75936 387 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 PLS3P13797 630 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 ARHGDIAP52565 204 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 MAGED2Q9UNF1 606 aaPredicted RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 LOC102724428A0A0B4J2F2 783 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 FTCDO95954 541 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 SKIP12755 728 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 EEF1B2P24534 225 aaKnown RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 NT5C2P49902 561 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 SIK1P57059 783 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 PCDHA13Q9Y5I0 950 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 NCF2P19878 526 aaPredicted RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 SERPINB13Q9UIV8 391 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 TRPA1O75762 1119 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 PLA2G4BP0C869 781 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 PYGBP11216 843 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 NNTQ13423 1086 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 Q3C1V9 767 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 C6orf118Q5T5N4 469 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 RNF217Q8TC41 542 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 ENOX1Q8TC92 643 aaKnown RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 CEP19Q96LK0 163 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 ELF1P32519 619 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 ADD2P35612 726 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 TAF1BQ53T94 588 aaPredicted RBP12.42□□□□□ -0.42
VCL-202ENST00000372755 PYCARDQ9ULZ3 195 aa12.42□□□□□ -0.42
VCL-202ENST00000372755 ADCY2Q08462 1091 aa12.41□□□□□ -0.42
VCL-202ENST00000372755 CUL1Q13616 776 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms