RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 SNX29Q8TEQ0 813 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 DOCK2Q92608 1830 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNX21-205ENST00000372547 COL4A3BPQ9Y5P4 624 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 DCCP43146 1447 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 COPB2P35606 906 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 PRPHP41219 470 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 GUF1Q8N442 669 aaKnown RBP13.12□□□□□ -0.31
SNX21-205ENST00000372547 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
SNX21-205ENST00000372547 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
SNX21-205ENST00000372547 NOC2LQ9Y3T9 749 aaKnown RBP13.12□□□□□ -0.31
SNX21-205ENST00000372547 COL1A1P02452 1464 aaPredicted RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 H0YGN5 161 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 KIF4AO95239 1232 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 FGRP09769 529 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 PDE6BP35913 854 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 CALCRLQ16602 461 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 FAM133BQ5BKY9 247 aaKnown RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 MYOCDQ8IZQ8 938 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 SPAG5Q96R06 1193 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 FGFBP2Q9BYJ0 223 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 NFS1Q9Y697 457 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 DRP2Q13474 957 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 ZNF444Q8N0Y2 327 aaPredicted RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 THOC1Q96FV9 657 aaKnown RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 FAM84BQ96KN1 310 aaPredicted RBP13.11□□□□□ -0.31
SNX21-205ENST00000372547 TRIM51Q9BSJ1 452 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
SNX21-205ENST00000372547 HGSO14964 777 aaPredicted RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 BUB1BO60566 1050 aaPredicted RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 TDP2O95551 362 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 CDC25CP30307 473 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 PTK2Q05397 1052 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 CUL1Q13616 776 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 PEX26Q7Z412 305 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 TBC1D1Q86TI0 1168 aaPredicted RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 METTL13Q8N6R0 699 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 PGRMC1O00264 195 aaKnown RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 GCFC2P16383 781 aaKnown RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 IFNAR2P48551 515 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 BIRC3Q13489 604 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 GRM4Q14833 912 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 WLSQ5T9L3 541 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 PSMD1Q99460 953 aa13.1□□□□□ -0.31
SNX21-205ENST00000372547 ARPP21Q9UBL0 812 aaPredicted RBP13.1□□□□□ -0.31
SNX21-205ENST00000372547 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 C21orf2O43822 256 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 SLC37A4O43826 429 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 CAND2O75155 1236 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 GNAQP50148 359 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 TATDN2Q93075 761 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 MYO1EQ12965 1108 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 TMEM266Q2M3C6 531 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 KRT79Q5XKE5 535 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 C3orf67Q6ZVT6 689 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 STAMBPL1Q96FJ0 436 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 PIGSQ96S52 555 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 TULP1O00294 542 aaPredicted RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 SLC9A1P19634 815 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 REXO1Q8N1G1 1221 aaKnown RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 CCDC197Q8NCU1 140 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 CHMP6Q96FZ7 201 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 NOD2Q9HC29 1040 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 PANK4Q9NVE7 773 aa13.09□□□□□ -0.31
SNX21-205ENST00000372547 GGA2Q9UJY4 613 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms