RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 NELFBQ8WX92 580 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 STAMQ92783 540 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 CCDC51Q96ER9 411 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 LRCH3Q96II8 777 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 GMCL1Q96IK5 515 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 PPP1R13BQ96KQ4 1090 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 PANX2Q96RD6 677 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 C7orf25Q9BPX7 421 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 KIAA1683Q9H0B3 1180 aa15.73■□□□□ 0.11
LDB3-204ENST00000372066 SZT2Q5T011 3432 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 PSMA7O14818 248 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 KLRC4O43908 158 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 CNMDO75829 334 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 TPM1P09493 284 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 BMP8BP34820 402 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 PBX1P40424 430 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 ICA1Q05084 483 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 MAP2K5Q13163 448 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 GIMAP8Q8ND71 665 aaPredicted RBP15.72■□□□□ 0.11
LDB3-204ENST00000372066 DHTKD1Q96HY7 919 aaPredicted RBP15.72■□□□□ 0.11
LDB3-204ENST00000372066 APBA2Q99767 749 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
LDB3-204ENST00000372066 USP27XA6NNY8 438 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 PP2D1A8MPX8 630 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 AKR1B15C9JRZ8 316 aaPredicted RBP15.71■□□□□ 0.11
LDB3-204ENST00000372066 EEF2P13639 858 aaKnown RBP15.71■□□□□ 0.11
LDB3-204ENST00000372066 VCAM1P19320 739 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 SLC1A4P43007 532 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 STX17P56962 302 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 ATP2B2Q01814 1243 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 TRAF1Q13077 416 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 AP3B2Q13367 1082 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 KMT5BQ4FZB7 885 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 MFSD14CQ5VZR4 134 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 SLFN13Q68D06 897 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 MOXD1Q6UVY6 613 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 PPFIBP1Q86W92 1011 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 CLEC10AQ8IUN9 316 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 BAG1Q99933 345 aaPredicted RBP15.71■□□□□ 0.11
LDB3-204ENST00000372066 THAP9Q9H5L6 903 aa15.71■□□□□ 0.11
LDB3-204ENST00000372066 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.11
LDB3-204ENST00000372066 BICDL2A1A5D9 508 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 EEF1GP26641 437 aaKnown RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 CDC25AP30304 524 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 LHX8Q68G74 356 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 TMEM139Q8IV31 216 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 CNGA4Q8IV77 575 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 SMYD4Q8IYR2 804 aaPredicted RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 TC2NQ8N9U0 490 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 TRIM9Q9C026 710 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 RPAP3Q9H6T3 665 aaPredicted RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 PSTPIP2Q9H939 334 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 SLC15A5A6NIM6 579 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 PPP1R11O60927 126 aaPredicted RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 TECP42680 631 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 PRCPP42785 496 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 MAGEA10P43363 369 aaPredicted RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 SEPT2Q15019 361 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 CDK5RAP3Q96JB5 506 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 TRMT1Q9NXH9 659 aaKnown RBP15.7■□□□□ 0.1
LDB3-204ENST00000372066 BTBD7Q9P203 1132 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 GDAQ9Y2T3 454 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 IVNS1ABPQ9Y6Y0 642 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 PFASO15067 1338 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
LDB3-204ENST00000372066 PVALEFA0A1B0GWK0 134 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 KCNJ18B7U540 433 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 COL6A1P12109 1028 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 USP11P51784 963 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 COPB1P53618 953 aaKnown RBP15.69■□□□□ 0.1
LDB3-204ENST00000372066 KCNJ12Q14500 433 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 KRT31Q15323 416 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 QRICH1Q2TAL8 776 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 HSP90AA4PQ58FG1 418 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 TCP11X2Q5H9J9 407 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 KRT79Q5XKE5 535 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 PHLPP2Q6ZVD8 1323 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 KCTD1Q719H9 257 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 FAM114A1Q8IWE2 563 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 FLRT1Q9NZU1 646 aa15.69■□□□□ 0.1
LDB3-204ENST00000372066 TDP2O95551 362 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 CCNE1P24864 410 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 CNGA1P29973 690 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 TXKP42681 527 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 ASIC1P78348 528 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
LDB3-204ENST00000372066 FOXR2Q6PJQ5 311 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 SLC17A8Q8NDX2 589 aa15.68■□□□□ 0.1
LDB3-204ENST00000372066 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms