RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SCYL2Q6P3W7 929 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 RHOT2Q8IXI1 618 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 ADAMTS13Q76LX8 1427 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 GH2P01242 217 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 CXCR5P32302 372 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 PCK1P35558 622 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 GEN1Q17RS7 908 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 RIOK1Q9BRS2 568 aaKnown RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 SPC25Q9HBM1 224 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 UBE2TQ9NPD8 197 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 FAN1Q9Y2M0 1017 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 POTEMA6NI47 508 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 NMT2O60551 498 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 ZMYND10O75800 440 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 CASP1P29466 404 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 CRKP46108 304 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 RFX5P48382 616 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 KCNB1Q14721 858 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 DCPSQ96C86 337 aaKnown RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 HINFPQ9BQA5 517 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 SUGT1Q9Y2Z0 365 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 TECPR2O15040 1411 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 GIPC1O14908 333 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 BUB1BO60566 1050 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 RAD17O75943 681 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 PPARDQ03181 441 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 NAA25Q14CX7 972 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 IQCB1Q15051 598 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 KCTD16Q68DU8 428 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 CCT6BQ92526 530 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 RAD54LQ92698 747 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 GPR101Q96P66 508 aaPredicted RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
DEPDC1-201ENST00000370966 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 CCND2P30279 289 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 EDEM3Q9BZQ6 932 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 CCSER1Q9C0I3 900 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 PCIF1Q9H4Z3 704 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 FBXO2Q9UK22 296 aaPredicted RBP12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 FAM170AA1A519 330 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 GMNNO75496 209 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 CCNA1P78396 465 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 C2orf54Q08AI8 447 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 RCSD1Q6JBY9 416 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 RNF10Q8N5U6 811 aaKnown RBP12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 TTC16Q8NEE8 873 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 BAIAP2L1Q9UHR4 511 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 TRIM49BA6NDI0 452 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 ECEL1O95672 775 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 PLTPP55058 493 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 ARHGAP4P98171 946 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 SLMAPQ14BN4 828 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 SGO2Q562F6 1265 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 NEK9Q8TD19 979 aa12.85□□□□□ -0.35
DEPDC1-201ENST00000370966 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CUL1Q13616 776 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 UHMK1Q8TAS1 419 aaKnown RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 ABCB6Q9NP58 842 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 PSAPP07602 524 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 SLC12A2P55011 1212 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CAPN9O14815 690 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CCT5P48643 541 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 DMTNQ08495 405 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 SURF1Q15526 300 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 ANKRD36BP1Q96IX9 119 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CPVLQ9H3G5 476 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
DEPDC1-201ENST00000370966 CTTNQ14247 550 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms