RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 RIC8AQ9NPQ8 531 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 TMEM260Q9NX78 707 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 MTCH2Q9Y6C9 303 aa17.36■□□□□ 0.37
SS18L1-202ENST00000370848 PRRC2BQ5JSZ5 2229 aaKnown RBP17.36■□□□□ 0.37
SS18L1-202ENST00000370848 hCG_1984214I3L0E3 225 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 TNFRSF10AO00220 468 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 CPLX1O14810 134 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 SORBS3O60504 671 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 EFCAB14O75071 495 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 ARHGEF15O94989 841 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
SS18L1-202ENST00000370848 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
SS18L1-202ENST00000370848 SP2Q02086 613 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 ST3GAL1Q11201 340 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 KIAA0753Q2KHM9 967 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 ZNF713Q8N859 430 aaPredicted RBP17.35■□□□□ 0.37
SS18L1-202ENST00000370848 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 VPS54Q9P1Q0 977 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
SS18L1-202ENST00000370848 ABHD14A-ACY1A0A1B0GW23 586 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 IGFBP4P22692 258 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 SSRP1Q08945 709 aaKnown RBP17.34■□□□□ 0.37
SS18L1-202ENST00000370848 HIC1Q14526 733 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 MBTPS1Q14703 1052 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 WNT8BQ93098 351 aa17.34■□□□□ 0.37
SS18L1-202ENST00000370848 FTOQ9C0B1 505 aaKnown RBP eCLIP17.34■□□□□ 0.37
SS18L1-202ENST00000370848 MICAL3Q7RTP6 2002 aa17.33■□□□□ 0.37
SS18L1-202ENST00000370848 SIP14410 1827 aa17.33■□□□□ 0.37
SS18L1-202ENST00000370848 EMSYQ7Z589 1322 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 KIF28PB7ZC32 967 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 LPXNO60711 386 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 GJB5O95377 273 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 GGPS1O95749 300 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 ZNF286BP0CG31 522 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 CLK2P49760 499 aaKnown RBP17.33■□□□□ 0.36
SS18L1-202ENST00000370848 SEMA3FQ13275 785 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 TCTN1Q2MV58 587 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 RASGRP4Q8TDF6 673 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 SPATA33Q96N06 139 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 BCAS3Q9H6U6 928 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 LMCD1Q9NZU5 365 aa17.33■□□□□ 0.36
SS18L1-202ENST00000370848 SPDYE3A6NKU9 549 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 CAND2O75155 1236 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 KCNJ6P48051 423 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 JAKMIP3Q5VZ66 844 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 PCNX4Q63HM2 1172 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 XRRA1Q6P2D8 792 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 TRIM22Q8IYM9 498 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 ADAMTS19Q8TE59 1207 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 ANO3Q9BYT9 981 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 ZMYND12Q9H0C1 365 aa17.32■□□□□ 0.36
SS18L1-202ENST00000370848 TSPYL2Q9H2G4 693 aaPredicted RBP17.32■□□□□ 0.36
SS18L1-202ENST00000370848 ESYT2A0FGR8 921 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 SPATA31C2B4DYI2 1134 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 BMP1P13497 986 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 DEFB103AP81534 67 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 ZNF618Q5T7W0 954 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
SS18L1-202ENST00000370848 METTL7BQ6UX53 244 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 PPM1EQ8WY54 764 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
SS18L1-202ENST00000370848 H3BRB1 525 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 FIBPO43427 364 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
SS18L1-202ENST00000370848 TLL1O43897 1013 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 JAK2O60674 1132 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 DEXIO95424 95 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 LGALS2P05162 132 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 ITGB5P18084 799 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 ADAM17P78536 824 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 NEDD9Q14511 834 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 CCDC85BQ15834 202 aaPredicted RBP17.3■□□□□ 0.36
SS18L1-202ENST00000370848 AAK1Q2M2I8 961 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 RAD9AQ99638 391 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 TUT1Q9H6E5 874 aaKnown RBP17.3■□□□□ 0.36
SS18L1-202ENST00000370848 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 COG5Q9UP83 839 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 TELO2Q9Y4R8 837 aa17.3■□□□□ 0.36
SS18L1-202ENST00000370848 LCHNA4D1U4 455 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 RFXAPO00287 272 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 LGR5O75473 907 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 ERVK-21P61565 698 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 HTRA4P83105 476 aaPredicted RBP17.29■□□□□ 0.36
SS18L1-202ENST00000370848 ZNF200P98182 395 aaPredicted RBP17.29■□□□□ 0.36
SS18L1-202ENST00000370848 GRB10Q13322 594 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 IKBKEQ14164 716 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 PLEKHG4Q58EX7 1191 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
SS18L1-202ENST00000370848 CCDC148Q8NFR7 591 aa17.29■□□□□ 0.36
SS18L1-202ENST00000370848 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
SS18L1-202ENST00000370848 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms