RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ARL8AQ96BM9 186 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 MPP4Q96JB8 637 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 KDM3AQ9Y4C1 1321 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 CHN1P15882 459 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 SUGP1Q8IWZ8 645 aaKnown RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 PDE8AO60658 829 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 SERPINI2O75830 405 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 HSPA6P17066 643 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 MYCBPAPQ8TBZ2 947 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 LZTS2Q9BRK4 669 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 CCDC68Q9H2F9 335 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 RBM12Q9NTZ6 932 aaKnown RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 PNMA2Q9UL42 364 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 CCND1P24385 295 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 PHKA1P46020 1223 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 GJC2Q5T442 439 aaPredicted RBP13.7□□□□□ -0.22
GPC4-201ENST00000370828 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 PDZD8Q8NEN9 1154 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 ZNF653Q96CK0 615 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 MIS12Q9H081 205 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 DISC1Q9NRI5 854 aa13.7□□□□□ -0.22
GPC4-201ENST00000370828 KLRF2D3W0D1 207 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 ZNF189O75820 626 aaPredicted RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 MT-ND3P03897 115 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 CD19P15391 556 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 PPARGC1AQ9UBK2 798 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 APOEP02649 317 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 VCAM1P19320 739 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 CTCFP49711 727 aaPredicted RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 FAM161BQ96MY7 647 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 PRKAB2O43741 272 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 DKC1O60832 514 aaKnown RBP eCLIP13.69□□□□□ -0.22
GPC4-201ENST00000370828 KRT75O95678 551 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 TRPM8Q7Z2W7 1104 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 ADD3Q9UEY8 706 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 LIMA1Q9UHB6 759 aaKnown RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
GPC4-201ENST00000370828 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 CLIC2O15247 247 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 PLCG2P16885 1265 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 SPATA21Q7Z572 469 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 TEKT4Q8WW24 435 aa13.69□□□□□ -0.22
GPC4-201ENST00000370828 CRCPO75575 148 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 DDAH1O94760 285 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 HAUS5O94927 633 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ANP32DO95626 131 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 PLS3P13797 630 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 RSRC2Q7L4I2 434 aaKnown RBP13.68□□□□□ -0.22
GPC4-201ENST00000370828 EPM2AIP1Q7L775 607 aaPredicted RBP13.68□□□□□ -0.22
GPC4-201ENST00000370828 MAPKAPK5Q8IW41 473 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 CCDC127Q96BQ5 260 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ANKZF1Q9H8Y5 726 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 SGK1O00141 431 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 MYBL1P10243 752 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 KCNA3P22001 575 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 SERPINB4P48594 390 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 KIF22Q14807 665 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 BTN2A1Q7KYR7 527 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 TTLL11Q8NHH1 800 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 ITFG2Q969R8 447 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 TRIM55Q9BYV6 548 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 TFCP2L1Q9NZI6 479 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 CAPN11Q9UMQ6 739 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 MAD1L1Q9Y6D9 718 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 CFAP69A5D8W1 941 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
GPC4-201ENST00000370828 MYL1P05976 194 aa13.68□□□□□ -0.22
GPC4-201ENST00000370828 SLC1A4P43007 532 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms