RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SEPT1Q8WYJ6 367 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 SLC5A5Q92911 643 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 TEKT3Q9BXF9 490 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 SEZ6LQ9BYH1 1024 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
COL9A1-204ENST00000370496 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
COL9A1-204ENST00000370496 EMSYQ7Z589 1322 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 CHMP2AO43633 222 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 NEMFO60524 1076 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 TLE2Q04725 743 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 KIAA0753Q2KHM9 967 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 C7orf31Q8N865 590 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 ETNPPLQ8TBG4 499 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 KAT2BQ92831 832 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 GLG1Q92896 1179 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 RIT2Q99578 217 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 C16orf70Q9BSU1 422 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 AZI2Q9H6S1 392 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 SAMM50Q9Y512 469 aa16.77■□□□□ 0.28
COL9A1-204ENST00000370496 GRIN2DO15399 1336 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 LTBP2Q14767 1821 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 H3BRB1 525 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 BACH1O14867 736 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.27
COL9A1-204ENST00000370496 CCNE2O96020 404 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 U2AF2P26368 475 aaKnown RBP eCLIP16.77■□□□□ 0.27
COL9A1-204ENST00000370496 ZNF746Q6NUN9 644 aaPredicted RBP16.77■□□□□ 0.27
COL9A1-204ENST00000370496 MIS18BP1Q6P0N0 1132 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 NFRKBQ6P4R8 1299 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 ANKRD33Q7Z3H0 272 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.27
COL9A1-204ENST00000370496 GJA10Q969M2 543 aa16.77■□□□□ 0.27
COL9A1-204ENST00000370496 TUT1Q9H6E5 874 aaKnown RBP16.77■□□□□ 0.27
COL9A1-204ENST00000370496 GSTTP1A0A1W2PQM5 241 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 WDR64B1ANS9 1081 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 CLTBP09497 229 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 SUPT20HL2P0C7V6 817 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 MARK3P27448 753 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 MCM7P33993 719 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 CALCRLQ16602 461 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 TTC38Q5R3I4 469 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 FAM160B1Q5W0V3 765 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 FAM20AQ96MK3 541 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 TOX2Q96NM4 488 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 KCNMB3Q9NPA1 279 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 ZMYND8Q9ULU4 1186 aaPredicted RBP16.76■□□□□ 0.27
COL9A1-204ENST00000370496 NOD1Q9Y239 953 aa16.76■□□□□ 0.27
COL9A1-204ENST00000370496 WDR81Q562E7 1941 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 WNT7AO00755 349 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 TBX3O15119 743 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
COL9A1-204ENST00000370496 SYN1P17600 705 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 CDK7P50613 346 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 JAK3P52333 1124 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 PTPN11Q06124 597 aaPredicted RBP16.75■□□□□ 0.27
COL9A1-204ENST00000370496 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
COL9A1-204ENST00000370496 BECN1Q14457 450 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 UNC45AQ9H3U1 944 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 ERAP1Q9NZ08 941 aa16.75■□□□□ 0.27
COL9A1-204ENST00000370496 MYH9P35579 1960 aaKnown RBP16.74■□□□□ 0.27
COL9A1-204ENST00000370496 HAS3O00219 553 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 B4GALT4O60513 344 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 PSMD10O75832 226 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 PSAPP07602 524 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 SFNP31947 248 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 MIER3Q7Z3K6 550 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 ZNF302Q9NR11 478 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 TRMT13Q9NUP7 481 aaKnown RBP16.74■□□□□ 0.27
COL9A1-204ENST00000370496 TMEM39AQ9NV64 488 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 GTF2IRD1Q9UHL9 959 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 TRPC6Q9Y210 931 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 PCDHA10Q9Y5I2 948 aa16.74■□□□□ 0.27
COL9A1-204ENST00000370496 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 LGR5O75473 907 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 SMIM10L2AP0DMW4 78 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 SMIM10L2BP0DMW5 78 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 SYT1P21579 422 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 STAT5BP51692 787 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 FAAP100Q0VG06 881 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 NBR1Q14596 966 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 ZNF174Q15697 407 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 ABHD15Q6UXT9 468 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 BRAPQ7Z569 592 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 FERMT3Q86UX7 667 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 SESTD1Q86VW0 696 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 CCDC60Q8IWA6 550 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-204ENST00000370496 TRPV6Q9H1D0 765 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 DISC1Q9NRI5 854 aa16.73■□□□□ 0.27
COL9A1-204ENST00000370496 HDAC6Q9UBN7 1215 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms