RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 KSR1Q8IVT5 923 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 BAP1Q92560 729 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 MS4A14Q96JA4 679 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 LRRC27Q9C0I9 530 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 ADAMTS1Q9UHI8 967 aa12.71□□□□□ -0.38
RAB39B-201ENST00000369454 A0A0U1RQG5 324 aaPredicted RBP12.7□□□□□ -0.38
RAB39B-201ENST00000369454 ATP8B1O43520 1251 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
RAB39B-201ENST00000369454 USP14P54578 494 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
RAB39B-201ENST00000369454 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 PAPD7Q5XG87 772 aaKnown RBP12.7□□□□□ -0.38
RAB39B-201ENST00000369454 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.7□□□□□ -0.38
RAB39B-201ENST00000369454 MAP2K7O14733 419 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 ZBTB22O15209 634 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 FTCDO95954 541 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 MYBP10242 640 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 GPS2Q13227 327 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 GOLPH3Q9H4A6 298 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 SH2D4AQ9H788 454 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 KDM3AQ9Y4C1 1321 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 A0A1W2PQJ5 194 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 H0YIN7 160 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 CYP2C19P33261 490 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 EHHADHQ08426 723 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 PDXDC1Q6P996 788 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 MIGA2Q7L4E1 593 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
RAB39B-201ENST00000369454 DNM3Q9UQ16 869 aa12.7□□□□□ -0.38
RAB39B-201ENST00000369454 RAD17O75943 681 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 PSMD2Q13200 908 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 PLS1Q14651 629 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
RAB39B-201ENST00000369454 SYDE2Q5VT97 1194 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 MAEAQ7L5Y9 396 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 TPH2Q8IWU9 490 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 TRIM58Q8NG06 486 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 PACSIN1Q9BY11 444 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 KCNMB3Q9NPA1 279 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 TLR2O60603 784 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 GCNT3O95395 438 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 BMP3P12645 472 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 SLC9A1P19634 815 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 FIGNQ5HY92 759 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 LRRC1Q9BTT6 524 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
RAB39B-201ENST00000369454 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 C21orf2O43822 256 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 NOL4O94818 638 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 SEMA3FQ13275 785 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 ZCWPW2Q504Y3 356 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 ALS2CR12Q96Q35 445 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 EML1O00423 815 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 CETN3O15182 167 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 HNRNPH2P55795 449 aaKnown RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 STRIP1Q5VSL9 837 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 HAUS3Q68CZ6 603 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 TMEM179Q6ZVK1 233 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 UBXN6Q9BZV1 441 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 NYAP2Q9P242 653 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 DMGDHQ9UI17 866 aaKnown RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 JRKLQ9Y4A0 524 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 MSH4O15457 936 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 POLD1P28340 1107 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 CASP4P49662 377 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 USP11P51784 963 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 SLC12A3P55017 1021 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 KLHL30Q0D2K2 578 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 RUSC1Q9BVN2 902 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 TSGA10Q9BZW7 698 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
RAB39B-201ENST00000369454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB39B-201ENST00000369454 A0A087X0T9 212 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 FAM228BP0C875 321 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 GIT2Q14161 759 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 KIAA1755Q5JYT7 1200 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 HGSNATQ68CP4 663 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms