RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 GBP2P32456 591 aaPredicted RBP10.04□□□□□ -0.8
TPM3-213ENST00000368545 ARSDP51689 593 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 GABPAQ06546 454 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 RASA3Q14644 834 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
TPM3-213ENST00000368545 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 MAFAQ8NHW3 353 aaPredicted RBP10.04□□□□□ -0.8
TPM3-213ENST00000368545 CTCFLQ8NI51 663 aaPredicted RBP10.04□□□□□ -0.8
TPM3-213ENST00000368545 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 SUV39H2Q9H5I1 410 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 KAT14Q9H8E8 782 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 SRRDQ9UH36 339 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 SERPINB13Q9UIV8 391 aa10.04□□□□□ -0.8
TPM3-213ENST00000368545 GOLGB1Q14789 3259 aaKnown RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 DTNBO60941 627 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 TROAPQ12815 778 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 RESTQ13127 1097 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 CCDC85BQ15834 202 aaPredicted RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 CFAP100Q494V2 611 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 ATL3Q6DD88 541 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 RELL1Q8IUW5 271 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 GLIS3Q8NEA6 775 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 RNF26Q9BY78 433 aaPredicted RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 TMOD2Q9NZR1 351 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 DDX49Q9Y6V7 483 aaKnown RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 ENTPD3O75355 529 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 KIF5BP33176 963 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 SOX9P48436 509 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 NNTQ13423 1086 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 SLC44A5Q8NCS7 719 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 FBXO18Q8NFZ0 1043 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 RAET1EQ8TD07 263 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 TMEM74Q96NL1 305 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 DEPDC7Q96QD5 511 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 P2RX7Q99572 595 aaKnown RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 ALG1Q9BT22 464 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 SCAND2PQ9GZW5 306 aaPredicted RBP10.03□□□□□ -0.8
TPM3-213ENST00000368545 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 ATRNL1Q5VV63 1379 aa10.03□□□□□ -0.8
TPM3-213ENST00000368545 NMT2O60551 498 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 DEXIO95424 95 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 NFIAQ12857 509 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 TRIM29Q14134 588 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 RCSD1Q6JBY9 416 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 FERMT3Q86UX7 667 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 U2AF1L4Q8WU68 220 aaKnown RBP10.02□□□□□ -0.81
TPM3-213ENST00000368545 ATXN2LQ8WWM7 1075 aaKnown RBP10.02□□□□□ -0.81
TPM3-213ENST00000368545 SLC26A6Q9BXS9 759 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 UBE2OQ9C0C9 1292 aaKnown RBP10.02□□□□□ -0.81
TPM3-213ENST00000368545 KCNH6Q9H252 994 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 IL17RBQ9NRM6 502 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 MYH4Q9Y623 1939 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 ELP1O95163 1332 aa10.02□□□□□ -0.81
TPM3-213ENST00000368545 TLR2O60603 784 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 EGFRP00533 1210 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 GRNP28799 593 aaKnown RBP10.01□□□□□ -0.81
TPM3-213ENST00000368545 AKAP17AQ02040 695 aaKnown RBP10.01□□□□□ -0.81
TPM3-213ENST00000368545 PWP1Q13610 501 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 DLGAP5Q15398 846 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
TPM3-213ENST00000368545 PLEKHG4Q58EX7 1191 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 FBXL19Q6PCT2 694 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
TPM3-213ENST00000368545 BRAPQ7Z569 592 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 CRACR2BQ8N4Y2 399 aaPredicted RBP10.01□□□□□ -0.81
TPM3-213ENST00000368545 PHKBQ93100 1093 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 HOOK2Q96ED9 719 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 PI4KBQ9UBF8 816 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 CNPY2Q9Y2B0 182 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 FIBPO43427 364 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 CETPP11597 493 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 XBP1P17861 261 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 NOVP48745 357 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 GNAQP50148 359 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 LCE2DQ5TA82 110 aaPredicted RBP10.01□□□□□ -0.81
TPM3-213ENST00000368545 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 TMTC3Q6ZXV5 915 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 BTLAQ7Z6A9 289 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 UBE2Q2Q8WVN8 375 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 CCDC17Q96LX7 622 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 KRTAP3-3Q9BYR6 98 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 RNF208Q9H0X6 261 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 STX8Q9UNK0 236 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 PPME1Q9Y570 386 aa10.01□□□□□ -0.81
TPM3-213ENST00000368545 MYO1BO43795 1136 aa10□□□□□ -0.81
TPM3-213ENST00000368545 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
TPM3-213ENST00000368545 GGCXP38435 758 aa10□□□□□ -0.81
TPM3-213ENST00000368545 UBE2HP62256 183 aa10□□□□□ -0.81
TPM3-213ENST00000368545 CTC1Q2NKJ3 1217 aa10□□□□□ -0.81
TPM3-213ENST00000368545 GNASQ5JWF2 1037 aa10□□□□□ -0.81
TPM3-213ENST00000368545 FKBP1CQ5VVH2 108 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms