RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FAM47CQ5HY64 1035 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 HERC6Q8IVU3 1022 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
TPM3-210ENST00000368530 TAAR1Q96RJ0 339 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 SLC9A7Q96T83 725 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 FTOQ9C0B1 505 aaKnown RBP eCLIP11.37□□□□□ -0.597e-6■■□□□ 12.9
TPM3-210ENST00000368530 TMEM63CQ9P1W3 806 aa11.37□□□□□ -0.59
TPM3-210ENST00000368530 PRRC2BQ5JSZ5 2229 aaKnown RBP11.37□□□□□ -0.59
TPM3-210ENST00000368530 ACTN1P12814 892 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 UBE2HP62256 183 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 RBL2Q08999 1139 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 TROAPQ12815 778 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 LY6KQ17RY6 165 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 ZSCAN23Q3MJ62 389 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 GPATCH4Q5T3I0 446 aaKnown RBP11.36□□□□□ -0.59
TPM3-210ENST00000368530 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
TPM3-210ENST00000368530 DGKHQ86XP1 1220 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 RETREG2Q8NC44 543 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 TET1Q8NFU7 2136 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 CTCFLQ8NI51 663 aaPredicted RBP11.36□□□□□ -0.59
TPM3-210ENST00000368530 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
TPM3-210ENST00000368530 AFG1LQ8WV93 481 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 LEO1Q8WVC0 666 aaPredicted RBP11.36□□□□□ -0.59
TPM3-210ENST00000368530 PIBF1Q8WXW3 757 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 WASF1Q92558 559 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 ANKS1AQ92625 1134 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 MAF1Q9H063 256 aa11.36□□□□□ -0.59
TPM3-210ENST00000368530 RBM28Q9NW13 759 aaKnown RBP11.36□□□□□ -0.59
TPM3-210ENST00000368530 TLL1O43897 1013 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 MMP3P08254 477 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 BFSP2Q13515 415 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 GNL2Q13823 731 aaKnown RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 PTGISQ16647 500 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 USH1GQ495M9 461 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 BRDTQ58F21 947 aaPredicted RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 TRAF7Q6Q0C0 670 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 PNMA1Q8ND90 353 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 ZNF396Q96N95 335 aaPredicted RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 SCAND2PQ9GZW5 306 aaPredicted RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 LCHNA4D1U4 455 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 GOLGA6L3A6NEY3 463 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 OPLAHO14841 1288 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 BAIAP3O94812 1187 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 DEXIO95424 95 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 CXCL10P02778 98 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 GRB10Q13322 594 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 TMCO2Q7Z6W1 182 aaPredicted RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 ADGRF4Q8IZF3 695 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 SRBD1Q8N5C6 995 aaKnown RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 CAGE1Q8TC20 777 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 ARNTL2Q8WYA1 636 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 DDX41Q9UJV9 622 aaKnown RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
TPM3-210ENST00000368530 V9GY48 417 aaPredicted RBP11.35□□□□□ -0.59
TPM3-210ENST00000368530 GOLGA6L4A6NEF3 574 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 B4DLN1 442 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 HAS3O00219 553 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 MAP3K13O43283 966 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 NBNO60934 754 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 RGS20O76081 388 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 GH1P01241 217 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 NT5C2P49902 561 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 WDR5P61964 334 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 DEFB103AP81534 67 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 HIC1Q14526 733 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 NSUN6Q8TEA1 469 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 AFAP1L1Q8TED9 768 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 WNT8BQ93098 351 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 EMID1Q96A84 441 aaPredicted RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 MPHOSPH6Q99547 160 aaKnown RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 RNF26Q9BY78 433 aaPredicted RBP11.34□□□□□ -0.59
TPM3-210ENST00000368530 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 GTF2IRD1Q9UHL9 959 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 ABCB11O95342 1321 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 CNTNAP5Q8WYK1 1306 aa11.34□□□□□ -0.59
TPM3-210ENST00000368530 TANC1Q9C0D5 1861 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 SYCE3A1L190 88 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 PRPF3O43395 683 aaKnown RBP11.33□□□□□ -0.6
TPM3-210ENST00000368530 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
TPM3-210ENST00000368530 CKBP12277 381 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 HOXD8P13378 290 aaPredicted RBP11.33□□□□□ -0.6
TPM3-210ENST00000368530 SELPP16109 830 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 GHRHRQ02643 423 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 FUT2Q10981 343 aa11.33□□□□□ -0.6
TPM3-210ENST00000368530 MBTPS1Q14703 1052 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms