RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SCN5AQ14524 2016 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 UMODL1Q5DID0 1318 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 CYP3A7-CYP3A51PA0A087WV96 503 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 IPO5O00410 1097 aaKnown RBP25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 CYP2C9P11712 490 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 CYP3A7P24462 503 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 MBOAT7Q96N66 472 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 PCYT2Q99447 389 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 NOC4LQ9BVI4 516 aaKnown RBP25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 PPP1R12CQ9BZL4 782 aa25.48■■□□□ 1.67
ECHDC1-203ENST00000368291 TANC1Q9C0D5 1861 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 FAM205CA6NFA0 338 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 TDP2O95551 362 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 CCNE2O96020 404 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 SUPT20HL2P0C7V6 817 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 KRT2P35908 639 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 ACTR2P61160 394 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 HMGN5P82970 282 aaKnown RBP25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 C7orf31Q8N865 590 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 ZNF577Q9BSK1 485 aa25.47■■□□□ 1.67
ECHDC1-203ENST00000368291 CCDC194A0A1B0GVG4 234 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 DDX39AO00148 427 aaKnown RBP25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 MSH4O15457 936 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 LGR5O75473 907 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 ATG7O95352 703 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 HOXC8P31273 242 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 Q4G0T1 1027 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 HABP4Q5JVS0 413 aaKnown RBP25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 MOXD1Q6UVY6 613 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 PIK3AP1Q6ZUJ8 805 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 UBE2OQ9C0C9 1292 aaKnown RBP25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 HIPK3Q9H422 1215 aa25.46■■□□□ 1.67
ECHDC1-203ENST00000368291 BTBD18B2RXH4 712 aa25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 CYP2C18P33260 490 aa25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 MCM2P49736 904 aa25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 ZNF200P98182 395 aaPredicted RBP25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 PTGISQ16647 500 aa25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 MFSD5Q6N075 450 aa25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 RNPEPQ9H4A4 650 aa25.45■■□□□ 1.67
ECHDC1-203ENST00000368291 EMSYQ7Z589 1322 aa25.45■■□□□ 1.66
ECHDC1-203ENST00000368291 SMIM10L2AP0DMW4 78 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 SMIM10L2BP0DMW5 78 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 EPHB4P54760 987 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 GUCY1B3Q02153 619 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 TRIM29Q14134 588 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 NEK8Q86SG6 692 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 DIS3L2Q8IYB7 885 aaKnown RBP25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 WNT8AQ9H1J5 351 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 TBC1D22BQ9NU19 505 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 ZNF215Q9UL58 517 aaPredicted RBP25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 LETM2Q2VYF4 491 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 ABHD15Q6UXT9 468 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 DHX38Q92620 1227 aaKnown RBP25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 SLC5A5Q92911 643 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 GJA10Q969M2 543 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 C8orf76Q96K31 380 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 BRMS1Q9HCU9 246 aa25.44■■□□□ 1.66
ECHDC1-203ENST00000368291 IGKV6D-21A0A0A0MT36 114 aa25.43■■□□□ 1.66
ECHDC1-203ENST00000368291 A0A1W2PPC1 479 aa25.43■■□□□ 1.66
ECHDC1-203ENST00000368291 SLC37A4O43826 429 aa25.43■■□□□ 1.66
ECHDC1-203ENST00000368291 SMARCAD1Q9H4L7 1026 aa25.43■■□□□ 1.66
ECHDC1-203ENST00000368291 TET1Q8NFU7 2136 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 MARK3P27448 753 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 ADAM17P78536 824 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 FPGSQ05932 587 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 PPP4R3AQ6IN85 833 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 TDHQ8IZJ6 230 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 FBXO18Q8NFZ0 1043 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 ETNPPLQ8TBG4 499 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 ERAP1Q9NZ08 941 aa25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 DDX25Q9UHL0 483 aaKnown RBP25.42■■□□□ 1.66
ECHDC1-203ENST00000368291 CSF2RAP15509 400 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 CCL23P55773 120 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 ZNF746Q6NUN9 644 aaPredicted RBP25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 FAM184AQ8NB25 1140 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 GLG1Q92896 1179 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 WNT8BQ93098 351 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 VWCEQ96DN2 955 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 RIT2Q99578 217 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 SETD4Q9NVD3 440 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 NOD1Q9Y239 953 aa25.41■■□□□ 1.66
ECHDC1-203ENST00000368291 C17orf102A2RUQ5 167 aa25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 WNT7AO00755 349 aa25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 PSMD10O75832 226 aa25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 C9orf50Q5SZB4 431 aa25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 C16orf59Q7L2K0 433 aa25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 CCDC60Q8IWA6 550 aaPredicted RBP25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 TMEM199Q8N511 208 aa25.4■■□□□ 1.66
ECHDC1-203ENST00000368291 PITPNM1O00562 1244 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 TREHO43280 583 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 GCFC2P16383 781 aaKnown RBP25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 STAT5BP51692 787 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 KRT76Q01546 638 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 RBL2Q08999 1139 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 PTK7Q13308 1070 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 SHHQ15465 462 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 TRIM71Q2Q1W2 868 aaKnown RBP25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 B3GNT9Q6UX72 402 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 PLPPR4Q7Z2D5 763 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 SCLYQ96I15 445 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms